Job Description P39199 Confidence 97.87% Date Thu Jan 5 11:58:28 GMT 2012 Rank 299 Aligned Residues 115 % Identity 16% Template c3evaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rna-directed rna polymerase ns5; PDBTitle: crystal structure of yellow fever virus methyltransferase complexed2 with s-adenosyl-l-homocysteine Resolution 1.50 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.							.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.
Query Sequence		I	N	N	K	F	A	G	L	I	S	K	Q	P	Q	H	I	L	D	M	C	T	G	S	G	C	I	A	I	A	C	A	Y	A	F	P	D	A	E	V	D	A	V	D	I	.	.	.	.	.	.	S	P	D	A	L	A	V	A	E	Q	N	I	E	E	H	G	L	I	H	N	V	I	P	I	R	S	D	L	F	R
Query Conservation																																														.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.					.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.
Template Sequence		L	R	W	F	H	E	R	G	Y	V	K	L	E	G	R	V	I	D	L	G	C	G	R	G	G	W	C	Y	Y	A	A	A	Q	K	E	V	S	G	V	K	G	F	T	L	G	R	D	G	H	E	K	P	M	N	.	.	.	.	.	.	.	.	V	Q	S	L	G	W	N	I	I	T	F	K	D	K	T	D	I	H
Template Known Secondary structure								T	T	S	S										T		T	T									T	S	T	T												T	T							.	.	.	.	.	.	.	.			B	T	T	G	G	G						S			T	T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.									.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		D	L	P	K	V	Q	Y	D	L	I	V	T	N	P	P	Y	V	D	A	E	D	M	S	D	L	P	N	E	Y	R	H	E	P	E	L	G	L	A	S	G	T	D	G	L	K	L	T	R	R	I	L	G	N	A	A	D	Y	L	.	A	D	D	G	V	L	I	C	E	V
Query Conservation																																																												.
Alig confidence															.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation															.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	E	P	V	K	C	D	T	L	L	C	D	.	.	.	I	G	E	S	S	S	S	S	V	T	E	G	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	R	V	L	D	T	V	E	K	W	L	A	C	G	V	D	N	F	C	V	K	V
Template Known Secondary structure		S	S						S						.	.	.						S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T			S
Template Predicted Secondary structure															.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160																	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions