Return to main results Retrieve Phyre Job Id

Job DescriptionP39199
Confidence86.12%DateThu Jan 5 11:58:28 GMT 2012
Rank360Aligned Residues71
% Identity18%Templatec3eagA_
PDB info PDB header:ligaseChain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl-meso- PDBTitle: the crystal structure of udp-n-acetylmuramate:l-alanyl-gamma-d-2 glutamyl-meso-diaminopimelate ligase (mpl) from neisseria3 meningitides
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140 .........150.........160.........170.........180.........190.........200........
Predicted Secondary structure 



.






























Query SS confidence 








.



































































Query Sequence  QPQHILDMC. TGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNP
Query Conservation     





. 


 
 
 

   
   
 
 


  

  
  
    

  

     
          
 

 

Alig confidence 








.
































..




....























Template Conservation    
 
 


 

 
 
 

  
   
  
   
          ..
   
....                 
 

 

Template Sequence  AXKHIHIIGIGGTFXGGLAAIAKEAGFEVSGCDAKXYPPXSTQ. . LEALG. . . . IDVYEGFDAAQLDEFKADVYVIGN
Template Known Secondary structure 


S

STT
SS

TT..TT....
S

GGGGGS


S
T
Template Predicted Secondary structure 














..

....












Template SS confidence 













































































   0.........10.........20.........30.........40.. ..... ..50.........60.........70.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions