Job Description P39199 Confidence 99.91% Date Thu Jan 5 11:58:28 GMT 2012 Rank 6 Aligned Residues 172 % Identity 20% Template c3dmgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable ribosomal rna small subunit methyltransferase; PDBTitle: t. thermophilus 16s rrna n2 g1207 methyltransferase (rsmc) in complex2 with adohcy Resolution 1.55 Å

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		101	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure														.	.	.																				.	.
Query SS confidence														.	.	.																				.	.
Query Sequence		G	H	E	F	Y	V	D	E	R	V	L	V	.	.	.	P	R	S	P	I	G	E	L	I	N	N	K	F	A	G	L	I	S	K	.	.	Q	P	Q	H	I	L	D	M	C	T	G	S	G	C	I	A	I	A	C	A	Y	A	F	P	D	A	E	V	D	A	V	D	I	S	P	D	A	L	A	V	A	E	Q	N
Query Conservation														.	.	.																				.	.
Alig confidence														.	.	.																				.	.																							.	.
Template Conservation																																																												.	.
Template Sequence		E	Y	T	F	H	H	L	P	G	V	F	S	A	G	K	V	D	P	A	S	L	L	L	L	E	A	L	Q	E	R	L	G	P	E	G	V	R	G	R	Q	V	L	D	L	G	A	G	Y	G	A	L	T	L	P	L	A	R	M	.	.	G	A	E	V	V	G	V	E	D	D	L	A	S	V	L	S	L	Q	K	G
Template Known Secondary structure									T	T		T	T	T	T	S																		T	T	T	T	T	T							T		T	T	S	T	T							T	.	.	T								S	B
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	E	H	G	L	I	H	N	V	I	P	I	R	S	D	L	F	R	D	L	P	K	V	Q	Y	D	L	I	V	T	N	P	P	Y	V	D	A	E	D	M	S	D	L	P	N	E	Y	R	H	E	P	E	L	G	L	A	S	G	T	D	G	L	K	L	T	R	R	I	L	G	N	A	A	D	Y	L	A	D	D
Query Conservation
Alig confidence																				.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	A	N	A	L	K	A	Q	A	L	H	S	D	V	D	E	A	.	L	T	E	E	A	R	F	D	I	I	V	T	N	P	P	F	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	G	A	V	I	L	D	V	A	Q	A	F	V	N	V	A	A	A	R	L	R	P	G
Template Known Secondary structure					T	T									S	T	T	T	T	.	S		T	T														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S	S
Template Predicted Secondary structure																				.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.																					310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	L	I	C	E	V	G	N	S	M	V	H	L	M	E	Q	Y	P	D	V	P	F	T	W	L	E	F	D	N	G	G	D	G	V	F	M	L	T	K	E
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		G	V	F	F	L	.	V	S	N	P	F	L	K	Y	E	P	L	L	E	E	K	F	G	A	F	Q	T	L	K	V	A	E	Y	K	V	L	F	A	E	K	R
Template Known Secondary structure							.				T	T	S											S								S	S	S
Template Predicted Secondary structure							.
Template SS confidence
		334	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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