Job Description P39199 Confidence 99.70% Date Thu Jan 5 11:58:28 GMT 2012 Rank 102 Aligned Residues 121 % Identity 20% Template c2yvlB_ PDB info PDB header:transferase Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of trna (m1a58) methyltransferase trmi from aquifex2 aeolicus Resolution 2.20 Å

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		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.																	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	V	L	V	P	R	S	P	I	G	E	L	I	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	A	G	L	I	S	K	Q	P	Q	H	I	L	D	M	C	T	G	S	G	C	I	A	I	A	C	A	Y	A	F	P	D	A	E	V	D	A	V	D	I	S	P	D	A	L	A	V
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Template Conservation																																																																.	.
Template Sequence		N	G	F	E	V	Y	R	P	T	L	E	E	I	I	L	L	G	F	E	R	K	T	Q	I	I	Y	P	K	D	S	F	Y	I	A	L	K	L	N	L	N	K	E	K	R	V	L	E	F	G	T	G	S	G	A	L	L	A	V	L	S	E	V	.	.	A	G	E	V	W	T	F	E	A	V	E	E	F	Y	K	T
Template Known Secondary structure		T	T																S			S	S															T	T			T	T									T	T	S										.	.	S	S							S	S
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		A	E	Q	N	I	E	E	H	G	L	I	H	N	V	I	P	I	R	S	D	L	F	R	D	.	L	P	K	V	Q	Y	D	L	I	V	T	N	P	P	Y	V	D	A	E	D	M	S	D	L	P	N	E	Y	R	H	E	P	E	L	G	L	A	S	G	T	D	G	L	K	L	T	R	R	I	L	G	N	A	A	D
Query Conservation																										.
Alig confidence																										.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Q	K	N	L	K	K	F	N	L	G	K	N	V	K	F	F	N	V	D	F	K	D	A	E	V	P	E	G	I	F	H	A	A	F	V	D	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	W	H	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	K	V	H	K
Template Known Secondary structure									T	T			T	T						S		T	T	T	S				T	T		B	S						S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.																	.	.	170	.	.															.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	A	D	D	G	V	L	I	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	M	E	G	A	P	V	G	F
Template Known Secondary structure			B		T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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