Job Description P39199 Confidence 97.50% Date Thu Jan 5 11:58:28 GMT 2012 Rank 310 Aligned Residues 132 % Identity 18% Template c2px2B_ PDB info PDB header:transferase Chain: B: PDB Molecule:genome polyprotein [contains: capsid protein c PDBTitle: crystal structure of the murray valley encephalitis virus2 ns5 2'-o methyltransferase domain in complex with sah3 (monoclinic form 1) Resolution 2.00 Å

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		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.							.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.
Query Sequence		F	Y	V	D	E	R	V	L	V	P	R	S	P	I	G	E	L	I	N	N	K	F	A	G	L	I	S	K	Q	P	Q	H	I	L	D	M	C	T	G	S	G	C	I	A	I	A	C	A	Y	A	F	P	D	A	E	V	D	A	V	D	I	S	.	.	.	.	.	.	P	D	A	L	A	V	A	E	Q	N	I	E
Query Conservation																																																																.	.	.	.	.	.
Alig confidence																																																																.	.	.	.	.	.				.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.
Template Sequence		L	E	V	D	R	T	E	A	H	P	V	S	R	G	T	A	K	L	R	W	L	V	E	R	R	F	V	Q	P	I	G	K	V	V	D	L	G	C	G	R	G	G	W	S	Y	Y	A	A	T	M	K	N	V	Q	E	V	R	G	Y	T	K	G	G	P	G	H	E	E	P	M	L	.	.	.	.	.	.	.	.	M
Template Known Secondary structure						T	T	T				S	S	S											T	T	S											T		T	T	S							T	T	S	T	T											S	T	T	S						.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.									.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		E	H	G	L	I	H	N	V	I	P	I	R	S	D	L	F	R	D	L	P	K	V	Q	Y	D	L	I	V	T	N	P	P	Y	V	D	A	E	D	M	S	D	L	P	N	E	Y	R	H	E	P	E	L	G	L	A	S	G	T	D	G	L	K	L	T	R	R	I	L	G	N	A	A	D	Y	L	A	D	D	.	G
Query Conservation																																																																																.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	S	Y	G	W	N	I	V	T	M	K	S	G	V	D	V	F	Y	K	P	S	E	I	S	D	T	L	L	C	D	I	G	E	S	S	P	S	A	E	I	E	E	Q	R	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	L	E	M	V	S	D	W	L	S	R	G	P	K
Template Known Secondary structure			S	T	T	G	G	G						S			G	G	G	S						S											S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T			S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		257	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	I	C	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	C	I	K	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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