Job Description P39199 Confidence 99.90% Date Thu Jan 5 11:58:28 GMT 2012 Rank 7 Aligned Residues 133 % Identity 22% Template c2pjdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase c; PDBTitle: crystal structure of 16s rrna methyltransferase rsmc Resolution 2.10 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		G	H	E	F	Y	V	D	E	R	V	L	V	P	R	S	P	.	.	.	I	G	E	L	I	N	N	K	F	A	G	L	I	S	K	Q	P	Q	H	I	L	D	M	C	T	G	S	G	C	I	A	I	A	C	A	Y	A	F	P	D	A	E	V	D	A	V	D	I	S	P	D	A	L	A	V	A	E	Q	N	I	E
Query Conservation																		.	.	.
Alig confidence																		.	.	.					.	.	.	.
Template Conservation																									.	.	.	.
Template Sequence		G	L	T	V	K	T	L	P	G	V	F	S	R	D	G	L	D	V	G	S	Q	L	L	.	.	.	.	L	S	T	L	T	P	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A
Template Known Secondary structure		T							T	T		T	T	S	S	S									.	.	.	.				S		T	T			S	B			B	T	T		T	T	S											T	T		B						S	B
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	G	L	I	H	N	V	I	P	I	R	S	D	L	F	R	D	L	P	K	V	Q	Y	D	L	I	V	T	N	P	P	Y	V	D	A	E	D	M	S	D	L	P	N	E	Y	R	H	E	P	E	L	G	L	A	S	G	T	D	G	L	K	L	T	R	R	I	L	G	N	A	A	D	Y	L	A	D	D	G	V
Query Conservation
Alig confidence						.	.														.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.														.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	N	G	V	.	.	E	G	E	V	F	A	S	N	V	F	S	E	V	.	K	G	R	F	D	X	I	I	S	N	P	P	F	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E
Template Known Secondary structure			T	T		.	.								S	T	T	T	T		.		S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S															G	G	G
Template Predicted Secondary structure						.	.														.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		242	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.																					.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		258	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		299	300	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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