Return to main results Retrieve Phyre Job Id

Job DescriptionP39199
Confidence99.68%DateThu Jan 5 11:58:28 GMT 2012
Rank108Aligned Residues151
% Identity21%Templatec2hnkC_
PDB info PDB header:transferaseChain: C: PDB Molecule:sam-dependent o-methyltransferase; PDBTitle: crystal structure of sam-dependent o-methyltransferase from2 pathogenic bacterium leptospira interrogans
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120.........130.........140.........150..... ....160.........170.........180.........190...
Predicted Secondary structure 












.














Query SS confidence 








































.





































Query Sequence  SPIGELINNKFAGLISKQPQHILDMCTGSGCIAIACAYAFP. DAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLF
Query Conservation   


 

   
         





 


 
 
 

   
.   
 
 


  

  
  
    

  

     
  
Alig confidence 













...























.





































Template Conservation       

  
    ... 
  






 
 

  

        
  

        
            
    


 
Template Sequence  PEEGQFLNILTKIS. . . GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSAL
Template Known Secondary structure  ...T



TTSS
TT
S
TT
GGGS
Template Predicted Secondary structure 
...





















Template SS confidence 















































































   46...50......... 60.........70.........80.........90.........100.........110.........120..
 
   194.. ...200.........210.........220.........230.........240.........250.....
Predicted Secondary structure 


..................
























Query SS confidence 


. . . . . . . . . . . . . . . . . .


























































Query Sequence  RDL. . . . . . . . . . . . . . . . . . PKVQYDLIVTNPPYVDAEDMSDLPNEYRHEPELGLASGTDGLKLTRRILGNAADYLADD
Query Conservation     ..................     
 

 




       
      

  

 

  

     

      
 

Alig confidence 


..................















............................














Template Conservation    
                       
 



     ............................          




Template Sequence  ETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKEN. . . . . . . . . . . . . . . . . . . . . . . . . . . . YPNYYPLILKLLKPG
Template Known Secondary structure 
SS

TTTTTT

STT

S
GGG............................
Template Predicted Secondary structure 






















............................




Template SS confidence 















































































   123......130.........140.........150......... 160.........170....
 
   256...260...... ...270.........280.........290......
Predicted Secondary structure 



................







Query SS confidence 










. . . . . . . . . . . . . . . .





























Query Sequence  GVLICEVGNSM. . . . . . . . . . . . . . . . VHLMEQYPDVPFTWLEFDNGGDGVFMLTKE
Query Conservation 
 
 

 
   ................                    
       
 
Alig confidence 










................





























Template Conservation 
 

 

    
              
  
   
          

  

     

Template Sequence  GLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVYNDSLVDVSLVPIADGVSLVRKR
Template Known Secondary structure 
TTGGGGGG
TT



TT
STT

Template Predicted Secondary structure 




















Template SS confidence 
























































   175....180.........190.........200.........210.........220.........230.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions