Job Description P52613 Confidence 2.06% Date Thu Jan 5 12:05:52 GMT 2012 Rank 56 Aligned Residues 129 % Identity 9% Template c2zv4O_ PDB info PDB header:structural protein Chain: O: PDB Molecule:major vault protein; PDBTitle: the structure of rat liver vault at 3.5 angstrom resolution Resolution 3.50 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	E	V	E	D	A	A	R	L	L	G	E	M	R	R	G	C	Q	Q	A	E	E	Q	L	K	M	L	I	D	Y	Q	N	E	Y	R	N	N	L	N	S	D	M	S	A	G	I	T	S	N	R	W	I	N	Y	Q	Q	F	I	Q	T	L	E	K	A	I	T	Q	H	R	Q	Q	L	N	Q	W	T	Q	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	T	R	D	A	L	Q	R	S	V	Q	L	A	I	E	I	T	T	N	S	Q	E	A	A	A	K	H	E	A	Q	R	L	E	Q	E	A	R	G	R	L	E	R	Q	K	I	L	D	Q	S	E	A	E	K	A	R	K	E	L	L	E	L	E	A	M	S	M	A	V	E	S	T	G	N	A	K	A	E	A	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		648	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	A	L	N	S	W	R	E	K	K	Q	R	L	Q	A	W	Q	T	L	Q	E	R	Q	S	T	A	A	L	L	A	E	N	R	L	D	Q	K	K	M	D	E	F	A	Q	R	A	A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	A	E	A	A	R	I	E	G	E	G	S	V	L	Q	A	K	L	K	A	Q	A	L	A	I	E	T	E	A	E	L	E	R	V	K	K	V	R	E	M	E	L	I	Y	A	R	A	Q
Template Known Secondary structure																												T	T	T	T	T																		T
Template Predicted Secondary structure
Template SS confidence
		728	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions