Job Description P52613 Confidence 5.76% Date Thu Jan 5 12:05:52 GMT 2012 Rank 28 Aligned Residues 125 % Identity 10% Template c2v71A_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:nuclear distribution protein nude-like 1; PDBTitle: coiled-coil region of nudel Resolution 2.24 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	T	L	K	D	L	A	E	K	E	V	E	D	A	A	R	L	L	G	E	M	R	R	G	C	Q	Q	A	E	E	Q	L	K	M	L	I	D	Y	Q	N	E	Y	R	N	N	L	N	S	D	M	S	A	G	I	T	S	N	R	W	I	N	Y	Q	Q	F	I	Q	T	L	E	K	A	I	T	Q	H	R	Q	Q
Query Conservation
Alig confidence																																																							.	.
Template Conservation																																																							.	.
Template Sequence		L	V	E	F	Q	E	G	S	R	E	L	E	A	E	L	E	A	Q	L	V	Q	A	E	Q	R	N	R	D	L	Q	A	D	N	Q	R	L	K	Y	E	V	E	A	L	K	E	K	L	E	H	Q	Y	A	Q	.	.	S	Y	K	Q	V	S	V	L	E	D	D	L	S	Q	T	R	A	I	K	E	Q	L	H	K	Y
Template Known Secondary structure																																																							.	.
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	Q	W	T	Q	K	V	D	I	A	L	N	S	W	R	E	K	K	Q	R	L	Q	A	W	Q	T	L	Q	E	R	Q	S	T	A	A	L	L	A	E	N	R	L	D	Q	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	E	L	E	Q	A	N	D	D	L	E	R	A	K	R	A	T	I	X	S	L	E	D	F	E	Q	R	L	N	Q	A	I	E	R	N	A	F	L	E	S	E	L	D	E	K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions