Job Description P10121 Confidence 96.21% Date Thu Jan 5 11:32:03 GMT 2012 Rank 455 Aligned Residues 142 % Identity 11% Template c4a4zA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:antiviral helicase ski2; PDBTitle: crystal structure of the s. cerevisiae dexh helicase ski2 bound to2 amppnp Resolution 2.40 Å

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		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.															.	350	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	F	V	I	L	M	V	G	V	N	G	V	G	K	T	T	T	I	G	K	L	A	R	Q	F	E	Q	Q	G	K	S	V	M	L	A	A	G	D	T	F	R	A	A	A	V	E	Q	L	Q	V	W	G	Q	R	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	V	I	A	Q	H	T	G
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.
Template Sequence		Q	G	D	S	V	F	V	A	A	H	T	S	A	G	K	T	V	V	A	E	Y	A	I	A	M	A	H	R	N	M	T	K	T	I	Y	T	S	P	.	.	I	K	A	L	S	N	Q	K	F	R	D	F	K	E	T	F	V	N	I	G	L	I	T	G	D	V	Q	I	N	P	D	A	N	C	L	I	M	T	T	E
Template Known Secondary structure		T	T									T	T	S		S														T	T								S	.	.		G	G	G										T	T									S	S					T	T	S	S
Template Predicted Secondary structure																																								.	.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380			.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.				.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		A	D	S	A	S	V	I	F	D	A	I	Q	A	A	K	.	.	.	A	R	N	I	D	V	L	I	A	D	T	A	G	R	L	Q	N	K	S	H	L	M	E	E	L	K	K	I	V	R	V	M	K	K	L	D	V	E	A	P	H	E	V	M	L	T	I	D	A	S	T	G	Q	N	A	V	S	Q	A	K	L	F
Query Conservation																	.	.	.
Alig confidence		.	.	.	.	.	.										.	.	.																.																		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																												.																		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	I	L	R	S	M	L	Y	R	G	A	D	L	I	R	D	V	E	F	V	I	F	D	E	V	H	Y	V	.	N	D	Q	D	R	G	V	V	W	E	E	V	I	I	M	L	P	.	.	.	.	.	.	Q	H	V	K	F	I	L	L	S	A	T	V	P	N	T	Y	E	F	A	N	W	I	G
Template Known Secondary structure		.	.	.	.	.	.									T		S	G	G	G	G									T	T			.		T	T		T	T										S		.	.	.	.	.	.	T	T											T	T
Template Predicted Secondary structure		.	.	.	.	.	.																												.																		.	.	.	.	.	.
Template SS confidence
								423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.							.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
		435	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	A	V	G	L	T	G	I	T	L	T	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	T	K	Q	K	N	I	Y	V	I	S	T	P	K
Template Known Secondary structure					T									S	S
Template Predicted Secondary structure
Template SS confidence
		490	.	.	.	.	.	.	.	.	.	500	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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