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Job DescriptionP10121
Confidence98.77%DateThu Jan 5 11:32:03 GMT 2012
Rank45Aligned Residues169
% Identity15%Templatec3ug7D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:arsenical pump-driving atpase; PDBTitle: crystal structure of get3 from methanocaldococcus jannaschii
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   293......300.........310.........320.........330.........340
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Query Sequence  PFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  TKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP. AHSLRDIFEQEFGHEPTKVKGYDNLYVVEIDPQKAMEEYK
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SSSTTSS



T.T

S


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   26...30.........40.........50.........60.... .....70.........80.........90.........100....
 
   341........350.........360.........370.........380.........
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Query Sequence  . . . . . . . . . . . . QVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQN. . . . . . . . . . . . . . . . . . .
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Template Sequence  EKLKAQIEENPFLGEMLEDQLEMAALSPGTDESAAFDVFLKYMDSNEFDVVIFDTAPTGHTLRFLGMPEVMDKYMTKLIK
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SSSTT

S
S
S


TTTGGGGG
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   105....110.........120.........130.........140.........150.........160.........170.........180....
 
   390.........400.........410.........420.........430...... ...440..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . KSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHE. . . . . AVGLTG
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Template Sequence  LRKQMSGFMKMMKKLLPFDYDKMLEELEKMKERIVRARNILSDPERTAFRLV. VIPEEMSILESERAMKALQKYGIPIDA
Template Known Secondary structure  S


T
TTT.
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   185....190.........200.........210.........220.........230...... ...240.........250.........260...
 
   443......450.........460...
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Query Sequence  ITLTKLDGTAKGGVIFSVADQ
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Template Sequence  VIVNQLIPEDVQCDFCRARRE
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S


S
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   271........280.........290.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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