Job Description P10121 Confidence 97.72% Date Thu Jan 5 11:32:03 GMT 2012 Rank 188 Aligned Residues 131 % Identity 20% Template c3lxxA_ PDB info PDB header:immune system Chain: A: PDB Molecule:gtpase imap family member 4; PDBTitle: crystal structure of human gtpase imap family member 4 Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	M	V	G	V	N	G	V	G	K	T	T	T	I	G	K	L	A	R	Q	F	E	Q	Q	G	K	S	V	M	L	A	A	G	D	T	F	R	A	A	A	V	E	Q	L	Q	V	W	G	Q	R	N	N	I	P	V	I	A	Q	H	T	G	A	D	S	A	S	V	I	F	D	A	I	Q	A	A	K	A	R	N
Query Conservation
Alig confidence																					.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	L	V	G	K	T	G	A	G	K	S	A	T	G	N	S	I	L	.	.	.	.	.	.	G	R	K	V	F	H	S	T	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	E	K	R	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	K	E
Template Known Secondary structure								T	T	S	S										.	.	.	.	.	.	T	S			S					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																					.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.							.	.	.	.	.	.	.	.	60	.																				.	.	.	.	.	.	.																	.	70	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.							.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.
Query Sequence		I	D	V	L	I	A	D	T	A	G	R	L	Q	N	K	S	H	L	M	E	E	L	K	K	I	V	R	V	M	K	K	L	D	V	E	A	P	H	E	V	M	L	T	I	D	A	S	T	G	Q	N	A	V	S	Q	A	K	L	F	H	.	.	.	.	.	.	E	A	V	G	L	T	G	I	T	L	T	K	L	D
Query Conservation																																																														.	.	.	.	.	.
Alig confidence												.	.																			.	.	.	.																											.	.	.	.	.	.
Template Conservation												.	.																			.	.	.	.
Template Sequence		T	E	L	V	V	V	D	T	P	G	.	.	I	F	N	A	E	T	S	K	E	I	I	R	C	I	L	L	T	S	.	.	.	.	P	G	P	H	A	L	L	L	V	V	P	L	G	R	Y	T	E	E	E	H	K	A	T	E	K	I	L	K	X	F	G	E	R	A	R	S	F	X	I	L	I	F	T	R	K	D
Template Known Secondary structure											S	.	.																	T	T	.	.	.	.	T			S								T	T			S	S																		G	G	G								G	G
Template Predicted Secondary structure												.	.																			.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	A	K	G	G	V	I	F	S	V	A	D	Q	F	G	I	P	I	R	Y	I	G	V	G	E
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		D	L	P	E	.	.	D	I	Q	D	L	X	D	I	F	G	D	R	Y	C	A	L	N	N	K	A
Template Known Secondary structure		G				.	.										S	S	S						T	T
Template Predicted Secondary structure						.	.
Template SS confidence
		158	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions