 |
Job Description | P10121 | Confidence | 97.01% | Date | Thu Jan 5 11:32:03 GMT 2012 |
Rank | 324 | Aligned Residues | 47 |
% Identity | 21% | Template | c3lfuA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:dna helicase ii; |
PDBTitle: crystal structure of e. coli uvrd
|
Resolution | 1.80 Å |
|
  |   |
293 | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | |
|
|
|
. | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | F | V | I | L | M | V | G | V | N | G | V | G | K | T | T | T | I | G | K | L | A | R | Q | F | E | Q | Q | G | K | . |
. |
. |
. |
S | V | M | L | A | A | G | D | T | F | R | A | A | A | V | E | Q | L | Q | V |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   | . | . | . | . |   |
|   |   |   |   |   |
|
|   |
|   |   |
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|
|   | . | . | . |
|   |
|
|   |
|   |   |   |
|   |   |
Template Sequence |   |
R | S | N | L | L | V | L | A | G | A | G | S | G | K | T | R | V | L | V | H | R | I | A | W | L | M | S | V | E | N | C | S | P | Y | S | I | M | A | V | . |
. |
. |
T | F | T | N | K | A | A | A | E | M | R | H |
Template Known Secondary structure |   |
S | S |
|  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|
| G | G | G |  |  |  |  | . | . | . |  | S | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
|
|
. | . | . | . | . | . | . | . | . | 70 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|