Job Description P10121 Confidence 97.41% Date Thu Jan 5 11:32:03 GMT 2012 Rank 239 Aligned Residues 112 % Identity 18% Template c3izyP_ PDB info PDB header:rna, ribosomal protein Chain: P: PDB Molecule:translation initiation factor if-2, mitochondrial; PDBTitle: mammalian mitochondrial translation initiation factor 2 Resolution 10.80 Å

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		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	P	F	V	I	L	M	V	G	V	N	G	V	G	K	T	T	T	I	G	K	L	A	R	Q	F	E	Q	Q	G	K	S	V	M	L	A	A	G	D	T	F	R	A	A	A	V	E	Q	L	Q	V	W	G	Q	R	N	N	I	P	V	I	A	Q	H	T	G	A	D	S	A	S	V	I	F	D	A	I	Q	A
Query Conservation
Alig confidence																																						.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	R	S	P	V	V	T	I	M	G	H	V	D	H	G	K	T	T	L	L	D	K	L	R	K	T	Q	V	A	A	M	E	A	G	G	I	.	.	.	.	T	Q	H	I	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	V	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						B						S	T	T	T	T																S	S	S			B	.	.	.	.				T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.																220	.	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.		.	.	.	.	.	.	.
Predicted Secondary structure																																																								.																		.
Query SS confidence																																																								.																		.
Query Sequence		A	K	A	R	N	I	D	V	L	I	A	D	T	A	G	R	L	Q	N	K	S	H	L	M	E	E	L	K	K	I	V	R	V	M	K	K	L	D	V	E	A	P	H	E	V	M	L	T	I	D	A	S	T	G	.	Q	N	A	V	S	Q	A	K	L	F	H	E	A	V	G	L	T	.	G	I	T	L	T	K	L
Query Conservation																																																								.																		.
Alig confidence		.	.																				.	.	.	.	.	.	.	.	.	.	.	.																						.																		.
Template Conservation		.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	P	S	G	E	K	I	T	F	L	D	T	P	G	H	A	A	F	S	A	.	.	.	.	.	.	.	.	.	.	.	.	M	R	A	R	G	T	Q	V	T	D	I	V	I	L	V	V	A	A	D	D	G	V	M	K	Q	T	V	E	S	I	Q	H	A	K	D	A	H	V	P	I	V	L	A	I	N	K	C
Template Known Secondary structure		.	.	S		S	S			B					S	S	S			T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	S	B	B	S	S	S	B	S	B	S	S						B	S	S	S															T	T	T								B	S	G
Template Predicted Secondary structure		.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.													.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		449
Predicted Secondary structure
Query SS confidence
Query Sequence		D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		291

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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