Job Description P10121 Confidence 98.70% Date Thu Jan 5 11:32:03 GMT 2012 Rank 52 Aligned Residues 205 % Identity 19% Template c3fkqA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ntrc-like two-domain protein; PDBTitle: crystal structure of ntrc-like two-domain protein (rer070207001320)2 from eubacterium rectale at 2.10 a resolution Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																																											.																																			.	.	.	.
Query SS confidence																																											.																																			.	.	.	.
Query Sequence		D	A	E	A	L	Y	G	L	L	K	E	E	M	G	E	I	L	A	K	V	D	E	P	L	N	V	E	G	K	A	P	F	V	I	L	M	V	G	V	N	G	.	V	G	K	T	T	T	I	G	K	L	A	R	Q	F	E	Q	Q	G	K	S	V	M	L	A	A	G	D	T	F	R	A	A	A	V	.	.	.	.
Query Conservation																																											.																																			.	.	.	.
Alig confidence																				.																							.																																			.	.	.	.
Template Conservation																				.
Template Sequence		R	V	D	V	I	F	K	Q	I	L	G	V	Y	S	D	X	A	A	.	N	V	A	T	I	S	G	E	N	D	K	S	S	V	V	I	F	T	S	P	C	G	G	V	G	T	S	T	V	A	A	A	C	A	I	A	H	A	N	X	G	K	K	V	F	Y	L	N	I	E	Q	C	G	T	T	D	V	F	F	Q	A
Template Known Secondary structure																				.		T							T	T	S									S	S	T	T	S	S																T										T	T
Template Predicted Secondary structure																				.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
																							338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.								.	.	.	.	.	.	.	.	370	.	.	.		.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.													.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.													.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	L	Q	V	W	G	Q	R	N	N	I	P	V	I	A	Q	H	T	G	A	D	S	A	.	.	.	.	.	.	.	S	V	I	F	D	A	I	Q	A	A	K	A	.	R	N	I	D	V	L	I	A	D	T	A	G	R	L	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.													.													.	.
Template Conservation																																																																															.	.
Template Sequence		E	G	N	A	T	X	S	D	V	I	Y	S	L	K	S	R	K	A	N	L	L	L	K	L	E	S	C	I	K	Q	S	Q	E	G	V	S	Y	F	S	S	T	K	V	A	L	D	I	L	E	I	S	Y	A	D	I	D	T	L	I	G	N	I	Q	G	X	D	N	Y	D	E	I	I	V	D	L	P	F	.	.	S
Template Known Secondary structure		S		S												S			S									T					T	T	S								S	S	G	G	G	G	G	G																T	S			S									.	.
Template Predicted Secondary structure																																																																															.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.		.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.										.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.																				.	.	.	.	.	.	.	.	.
Query SS confidence																																					.																				.	.	.	.	.	.	.	.	.
Query Sequence		N	K	S	H	L	M	E	E	L	K	K	I	V	R	V	M	K	K	L	D	V	E	A	P	H	E	V	M	L	T	I	D	A	S	T	.	G	Q	N	A	V	S	Q	A	K	L	F	H	E	A	V	G	L	T	G	.	.	.	.	.	.	.	.	.	I	T	L	T	K	L	D	G	T	A	K	G	G	V	I	F
Query Conservation																																					.																				.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.															.																				.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.
Template Sequence		L	E	I	E	K	L	K	L	L	.	.	.	.	.	.	.	.	.	.	.	.	S	K	A	W	R	I	I	V	V	N	D	G	S	Q	L	S	N	Y	K	F	X	R	A	Y	E	S	V	V	L	L	E	Q	N	D	D	I	N	I	I	R	N	X	N	X	I	Y	N	K	F	S	N	K	N	S	.	.	.	.	.
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	T	T		S																											T	T	S	T	T				G	G	G							S			T	T	T		.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260													.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	A	D	Q	F	G	I	P	I	R	Y	I	G	V	G	E	R	I	E	D	L	R	P	F	K	A	D	D	F	I	E	A	L
Query Conservation
Alig confidence		.	.																					.	.	.
Template Conservation		.	.																					.	.	.
Template Sequence		.	.	E	X	L	S	N	I	S	I	K	T	I	G	G	A	P	R	Y	E	H	A	.	.	.	T	V	R	Q	I	I	E	A	L
Template Known Secondary structure		.	.					S		S											T	T		.	.	.
Template Predicted Secondary structure		.	.																					.	.	.
Template SS confidence
				315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.				.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions