Job Description P10121 Confidence 96.59% Date Thu Jan 5 11:32:03 GMT 2012 Rank 407 Aligned Residues 88 % Identity 17% Template c3e2iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidine kinase; PDBTitle: crystal structure of thymidine kinase from s. aureus Resolution 2.01 Å

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		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	V	I	L	M	V	G	V	N	G	V	G	K	T	T	T	I	G	K	L	A	R	Q	F	E	Q	Q	G	K	S	V	M	L	A	A	G	D	T	F	R	A	A	A	V	E	Q	L	Q	V	W	G	Q	R	N	N	I	P	V	I	A	Q	H	T	G	A	D	S	A	S	V	I	F	D	A	I	Q	A	A	K
Query Conservation
Alig confidence																																							.						.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation																																							.						.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Sequence		G	W	I	E	C	I	T	G	S	X	F	S	G	K	S	E	E	L	I	R	R	L	R	R	G	I	Y	A	K	Q	K	V	V	V	F	K	P	.	A	S	H	N	G	.	.	.	.	.	.	.	.	.	.	.	N	A	I	E	A	I	N	I	S	K	A	S	E	I	X	T	H	D	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T	S																T	T									.			B	T	T	.	.	.	.	.	.	.	.	.	.	.	B								S	S	G	G	G	G	G	G	S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.						.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.												50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	N	I	D	V	L	I	A	D	T	A	G	R	L	Q	N	K	S	H	L	M	E	E	L	K	K	I	V	R
Query Conservation
Alig confidence															.	.
Template Conservation															.	.
Template Sequence		L	T	N	V	D	V	I	G	I	D	E	V	Q	.	.	F	F	D	D	E	I	V	S	I	V	E	K	L	S	A
Template Known Secondary structure			T	T		S							G	G	.	.	G	S		T
Template Predicted Secondary structure															.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions