Job Description P10121 Confidence 97.26% Date Thu Jan 5 11:32:03 GMT 2012 Rank 268 Aligned Residues 80 % Identity 25% Template c3crqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: structure of trna dimethylallyltransferase: rna2 modification through a channel Resolution 2.20 Å

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		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.													.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query Sequence		P	F	V	I	L	M	V	G	V	N	G	V	G	K	T	T	T	I	G	K	L	A	R	Q	F	E	Q	Q	G	K	S	V	M	L	A	A	G	D	T	F	R	A	A	A	V	E	Q	L	Q	V	W	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	R	N	N	I	P	V	I	A	Q	H	T	.	.	.	.
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Alig confidence																											.	.	.	.	.											.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation																											.	.	.	.	.											.	.	.	.	.	.	.	.
Template Sequence		P	P	A	I	F	L	M	G	P	T	A	A	G	K	T	D	L	A	M	A	L	A	D	A	L	.	.	.	.	.	P	C	E	L	I	S	V	D	S	A	.	.	.	.	.	.	.	.	L	I	Y	R	G	M	D	I	G	T	A	K	P	S	R	E	L	L	A	R	Y	P	H	R	L	I	D	I	R	D	P	A
Template Known Secondary structure										S	T	T	S	S										T	T	S	.	.	.	.	.									T	T	.	.	.	.	.	.	.	.	T	T	B	T	T			T	T	T	T										S				S	S	S		B		T	T
Template Predicted Secondary structure																											.	.	.	.	.											.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.						30	.	.	.	.	.	.	.	.	.									40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
						357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	G	A	D	S	A	S	V	I	F	D	A	I	Q	A	A	K	A	R	N	I	D	V	L	I	A	D	T	A	G
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		E	S	Y	S	A	A	E	F	R	A	D	A	L	A	A	M	A	K	A	T	A	R	G	R	I	P	L	L	V	G	G	T	M
Template Known Secondary structure		S																					T	T								S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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