Job Description P10121 Confidence 96.82% Date Thu Jan 5 11:32:03 GMT 2012 Rank 369 Aligned Residues 124 % Identity 19% Template c3bk7A_ PDB info PDB header:hydrolyase/translation Chain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.																															.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Query Sequence		K	A	P	F	V	I	L	M	V	G	V	N	G	V	G	K	T	T	T	I	G	K	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	F	E	Q	Q	G	K	S	V	M	L	A	A	G	D	T	F	R	A	A	A	V	.	.	.
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation
Template Sequence		K	D	G	M	V	V	G	I	V	G	P	N	G	T	G	K	T	T	A	V	K	I	L	A	G	Q	L	I	P	N	L	C	E	D	N	D	S	W	D	N	V	I	R	A	F	R	G	N	E	L	Q	N	Y	F	E	R	L	K	N	G	E	I	R	P	V	V	K	P	Q	Y	V	D	L	L	P	K	A	V	K	G
Template Known Secondary structure			T	T	S								T	T	S	S									T	T	S	S				T	T	T	T											T	T	T	S	T											T	S								S		G	G	G	G	G	G	T			S
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
														338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.			.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																					.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																					.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	E	Q	L	Q	V	W	G	Q	R	N	N	I	P	V	I	A	Q	H	T	G	A	D	S	A	S	V	I	F	D	A	I	Q	A	A	K	A	.	.	R	N	I	D	V	L	I	A	D	T	A	G	R	L	Q	N	K	S	H	L	M	E	E	L	K	K	I	V	R	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																					.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																					.	.													.
Template Conservation																																																																.
Template Sequence		K	V	R	E	L	L	K	K	V	D	E	V	G	K	F	E	E	V	V	K	E	L	E	L	E	N	V	L	D	R	E	L	H	Q	L	S	G	G	E	L	Q	R	V	A	I	A	A	A	L	L	R	K	A	H	F	Y	F	F	D	E	P	S	.	S	Y	L	D	I	R	Q	R	L	K	V	A	R	V	I	R	R
Template Known Secondary structure		B								T			S	S									T	T		T	T	G	G	G	S	B	G	G	G																	S			S							T	T	.	T	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	K	L	D	V	E	A	P	H	E	V	M	L	T	I	D
Query Conservation
Alig confidence					.	.	.	.	.
Template Conservation					.	.	.	.	.
Template Sequence		L	A	N	.	.	.	.	.	E	G	K	A	V	L	V	V	E
Template Known Secondary structure					.	.	.	.	.	T	T
Template Predicted Secondary structure					.	.	.	.	.
Template SS confidence
		260	.	.						.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions