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Job DescriptionP10121
Confidence97.59%DateThu Jan 5 11:32:03 GMT 2012
Rank208Aligned Residues125
% Identity12%Templatec3b9pA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cg5977-pa, isoform a; PDBTitle: spastin
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   265....270.........280.........290.........300.........310.........320.........330.........340....
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Query Sequence  EALYGLLKEEMGEILAKVDEPLNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWG
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Template Sequence  DVAKQALQEMVILPSVRPELFTGLRAP. AKGLLLFGPPGNGKTLLARAVATEC. . . SATFLNISAASLTSKY. . . . . . . .
Template Known Secondary structure  T
GGGS
GGG

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SSSSSS
T...T
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   489490.........500.........510..... ....520.........530.........540 .........550......
 
   345....350.........360.........370.........380..... ....390.........400.........410.........
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Query Sequence  QRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAG. . . . . RLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTI
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Template Sequence  . . . . . . . . . . . . VGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSEREASRRLKTEFLVEFDG. . . . . . . . . LPRIVVLA
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   557..560.........570.........580.........590.........600....... ..610.....
 
   420..
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Query Sequence  DAS
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Template Sequence  ATN
Template Known Secondary structure  S
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   627..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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