Job Description P10121 Confidence 97.12% Date Thu Jan 5 11:32:03 GMT 2012 Rank 301 Aligned Residues 154 % Identity 16% Template c2x2fD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:dynamin-1; PDBTitle: dynamin 1 gtpase dimer, short axis form Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	E	E	M	G	E	I	L	A	K	V	D	E	P	L	N	V	E	G	K	A	P	F	V	I	L	M	V	G	V	N	G	V	G	K	T	T	T	I	G	K	L	A	R	Q	F	E	Q	Q	G	K	S	V	M	L	A	A	G	D	T	F	R	A	A	A	V	E	Q	L	Q	V	W	G	Q	R	N	N	I	P
Query Conservation
Alig confidence																						.	.	.	.	.																				.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.																				.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	P	L	V	N	R	L	Q	D	A	F	S	A	D	L	D	L	P	Q	.	.	.	.	.	I	A	V	V	G	G	Q	S	A	G	K	S	S	V	L	E	N	F	V	.	.	.	.	.	.	G	R	D	F	L	P	R	G	S	G	I	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	P
Template Known Secondary structure		G																				.	.	.	.	.						B	T	T	S	S							T	T	T	.	.	.	.	.	.		S	S		S				S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																						.	.	.	.	.																				.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.						.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.							.	.	50	.	.	.	.	.	.	.	.	.	60															.	.	.
		351	.	.	.																				.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.																		.	.	380	.	.	.	.	.	.			.	.	.	390	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query Sequence		V	I	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	T	G	A	D	S	A	S	V	I	F	D	A	I	Q	A	A	K	A	R	N	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	I	A	D	T	A	G	R	.	.	L	Q	N	K	S	H
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation
Template Sequence		L	V	L	Q	L	V	N	A	T	T	E	Y	A	E	F	L	H	C	K	G	K	K	F	T	D	F	E	E	V	R	L	E	I	E	A	E	T	D	R	V	T	G	T	N	K	G	I	S	P	V	P	I	N	L	R	V	Y	S	P	H	V	L	N	L	T	L	V	D	L	P	G	X	T	K	V	P	V	G	D	Q
Template Known Secondary structure										S	S						T	T	S	T	T			B																				S	S	S					S									T	T			S									B		S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.				.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		L	M	E	E	L	K	K	I	V	R	V	M	K	K	L	D	V	E	A	P	H	E	V	M	L	T	I	D	A	S	.	.	.	T	G	Q	N	A	V	S	Q	A	K	L	F	H	E	A	V	G	L	T	G	I	T	L	T	K	L	D
Query Conservation																																.	.	.
Alig confidence																																.	.	.
Template Conservation
Template Sequence		P	P	D	I	E	F	Q	I	R	D	X	L	X	Q	F	V	T	K	E	N	C	L	I	L	A	V	S	P	A	N	S	D	L	A	N	S	D	A	L	K	V	A	K	E	V	D	P	Q	G	Q	R	T	I	G	V	I	T	K	L	D
Template Known Secondary structure			T	T														T	S	T	T									T	T	S		G	G	G												T	T		S	S								G	G
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions