 |
Job Description | P10121 | Confidence | 95.87% | Date | Thu Jan 5 11:32:03 GMT 2012 |
Rank | 494 | Aligned Residues | 92 |
% Identity | 23% | Template | c2wtzC_ |
PDB info |
PDB header:ligase | Chain: C: PDB Molecule:udp-n-acetylmuramoyl-l-alanyl-d-glutamate- |
PDBTitle: mure ligase of mycobacterium tuberculosis
|
Resolution | 3.00 Å |
|
 |
  |   |
268 | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | G | L | L | K | E | E | M | G | E | I | L | A | K | V | D | E | P | L | N | V | E | G | K | A | P | F | V | I | L | M | V | G | V | N | G | V | G | K | T | T | T | I | G | K | L | A | R | Q | F | E | Q | Q | G | K | S | V | M | L | A | A | G | D | T | F | R | A | A | A | V | E | Q | L | Q | V | W | G | Q | R | N |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
Template Conservation |   |
  |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |
|
|
|
|
|
|
|   |
| . | . |
|
|
|
|   |   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
Template Sequence |   |
R | G | V | L | G | G | L | A | A | T | V | Y | G | H | P | S | E | R | L | T | . |
. |
. |
. |
. |
. |
. |
V | I | G | I | T | G | T | S | G | . |
. |
K | T | T | T | T | Y | L | V | E | A | G | L | R | A | A | G | R | V | A | G | L | I | G | T | I | G | I | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T |
| G | G | G | S | S |  | . | . | . | . | . | . | . |  |  |  |  |  | S | S | S |
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | S | S | S |
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 150 | . | . | . | . | . | . | |
|
. | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. |
  |
  |   |
348 | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | I | P | V | I | A | Q | H | T | G | A | D | S | A | S | V | I | F | D | A | I | Q | A | A | K | A | R | N | I | D | V | L | I | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
G | G | A | D | L | P | S | A | L | T | T | P | E | A | P | T | L | Q | A | M | L | A | A | M | V | E | R | G | V | D | T | V | V | M |
Template Known Secondary structure |   |
T | T |  |  |  |
|
| S | S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
186 | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|