Job Description P10121 Confidence 98.73% Date Thu Jan 5 11:32:03 GMT 2012 Rank 48 Aligned Residues 208 % Identity 16% Template c2wojD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:atpase get3; PDBTitle: adp-alf4 complex of s. cerevisiae get3 Resolution 1.99 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.			.	320	.	.	.	.	.	.	.	.	.	330																												.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	E	G	K	A	P	F	V	I	L	M	V	G	V	N	G	V	G	K	T	T	T	I	G	K	L	A	R	Q	F	E	.	.	Q	Q	G	K	S	V	M	L	A	A	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	R	A	A	A	V	E
Query Conservation																																	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	S	T	T	H	K	W	I	F	V	G	G	K	G	G	V	G	K	T	T	S	S	C	S	I	A	I	Q	M	A	L	S	Q	P	N	K	Q	F	L	L	I	S	T	D	P	A	H	N	L	S	D	A	F	G	E	K	F	G	K	D	A	R	K	V	T	G	M	N	N	L	S	C	M	E	I	D	P	S	A
Template Known Secondary structure			T		S	S									S	T	T	S	S																	T	T	S									S	S								T	S				S	S					T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.										.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.																				.	.	.	.	390
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	Q	V	W	G	Q	R	N	N	I	P	V	I	A	Q	H	T	G	A	.	.	.	.	.	.	.	.	.	D	S	A	S	V	I	F	D	A	I	Q	A	A	K	A	R	N	I	D	V	L	I	A	D	T	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	Q	N	K
Query Conservation																						.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	K	D	M	N	D	M	A	V	S	R	G	S	L	L	Q	G	G	A	L	A	D	L	T	G	S	I	P	G	I	D	E	A	L	S	F	M	E	V	M	K	H	I	K	R	F	D	T	V	I	F	D	T	A	P	T	G	H	T	L	R	F	L	Q	L	P	N	T	L	S	K	L	L	E	K	F	G	I	S
Template Known Secondary structure																			T	S							T	T	S	T	T																																														T	T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.			.	.	.	.	.	.						.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure																																				.																		.	.							.	.	.	.	.
Query SS confidence																																				.																		.	.							.	.	.	.	.
Query Sequence		S	H	L	M	E	E	L	K	K	I	V	R	V	M	K	K	L	D	V	E	A	P	H	E	V	M	L	T	I	D	A	S	T	G	.	Q	N	A	V	S	Q	A	K	L	F	H	E	A	V	G	L	T	.	.	G	I	T	L	T	K	.	.	.	.	.	L	D	G	T	A	K	G	G	V	I	F	S	V	A	D
Query Conservation																																				.																		.	.							.	.	.	.	.
Alig confidence																																				.																		.	.							.	.	.	.	.
Template Conservation
Template Sequence		G	K	L	N	E	L	K	A	N	V	E	T	I	R	Q	Q	F	T	D	P	D	L	T	T	F	V	C	V	C	I	S	E	F	L	S	L	Y	E	T	E	R	L	I	Q	E	L	I	S	Y	D	M	D	V	N	S	I	I	V	N	Q	L	L	F	A	E	N	D	Q	C	K	R	C	Q	A	R	W	K	M	Q	K
Template Known Secondary structure																			T		T	T	T									S	S																	T	T														T	T	S
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		463	.										.	.	.	.	.	470	.	.		.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.									.
Query SS confidence				.	.	.	.	.	.	.	.	.									.
Query Sequence		Q	F	.	.	.	.	.	.	.	.	.	G	I	P	I	R	Y	I	G	.	V	G	E	R	I	E	D	L	R	P	F	K	A	D	D	F	I	E	A	L	F	A	R	E	D
Query Conservation				.	.	.	.	.	.	.	.	.									.
Alig confidence				.	.	.	.	.	.	.	.	.									.											.	.
Template Conservation																																.	.
Template Sequence		K	Y	L	D	Q	I	D	E	L	Y	E	D	F	H	V	V	K	M	P	L	C	A	G	E	I	R	G	L	N	N	.	.	L	T	K	F	S	Q	F	L	N	K	E	Y	N
Template Known Secondary structure											T	T	T	S									S	S				S				.	.										S
Template Predicted Secondary structure																																.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions