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Job DescriptionP10121
Confidence100.00%DateThu Jan 5 11:32:03 GMT 2012
Rank9Aligned Residues287
% Identity37%Templatec2v3cC_
PDB info PDB header:signaling proteinChain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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Query Sequence  LLKTKENLGSGFISLFRGKKID. . . . DDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQL. . . . RDAEALYGLLKEE
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Template Sequence  MDKLGENLNKALNKLKAAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRALEEKTPKGLSKKEHIIKIVYEE
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Query Sequence  MGEILAKVDEPLNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQ
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Template Sequence  LVKLLGEEAKKLELNPKKQNVILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGD
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Query Sequence  HTG. ADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKL
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Template Sequence  ETRTKSPVDIVKEGMEKFK. . KADVLIIDTAGRHKEEKGLLEEMKQIKEITN. . . . . . PDEIILVIDGTIGQQAGIQAKA
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Query Sequence  FHEAVG. LTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFARED
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Template Sequence  FKEAVGEIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLLGMGD
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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