Job Description P10121 Confidence 97.82% Date Thu Jan 5 11:32:03 GMT 2012 Rank 164 Aligned Residues 187 % Identity 23% Template c2qptA_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:eh domain-containing protein-2; PDBTitle: crystal structure of an ehd atpase involved in membrane remodelling Resolution 3.10 Å

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		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290												.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	G	L	L	K	E	E	M	G	E	I	L	A	K	V	D	E	P	L	N	V	E	G	.	.	.	.	.	.	.	.	.	.	.	K	A	P	F	V	I	L	M	V	G	V	N	G	V	G	K	T	T	T	I	G	K	L	A	R	Q	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	S	S	L	K	E	L	Y	R	T	K	L	L	P	L	E	E	H	Y	R	F	G	S	F	H	S	P	A	L	E	D	A	D	F	D	G	K	P	M	V	L	V	A	G	Q	Y	S	T	G	K	T	S	F	I	Q	Y	L	L	E	Q	E	V	P	G	S	R	V	G	P	E	P	T	T	D	C	F	V	A	V
Template Known Secondary structure														T							T	T	G	G	G	T	T						S	T	T	T	S	S									B	T	T	S											T	S			S	S					S	S					S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	G	K	S	V	M	L	A	A	G	D	T	F	R	A	A	A	V	E	Q	L	Q	V	W	G	Q	R	N	N	I	P	V	I	A	Q	H	T	G	A	D	S	A	S	V	I	F	D	A	I	Q	A	A	K	A	R	N	I	D	V	L	I	A	D	T	A	G	R	L	Q	N	K	S	H	L	M	E	E	L	K
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	H	G	E	T	E	G	T	V	P	G	N	T	F	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	M	C	A	Q	L	P	N	Q	V	L	E	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	I	D	T	P	G	I	L	S	R	G	Y	D	F	P	A	V	L	R
Template Known Secondary structure					S	S	S										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T															.	.	.	.	.	.	.	.	.	.	.	.	.	.								B					S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																.	.	.	120	.	.	.	.	.	.	.	.	.	130	.															.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.				.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.											.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure																												.	.	.																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.																																.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	V	R	V	M	K	K	L	D	V	E	A	P	H	E	V	M	L	T	I	D	A	S	T	G	.	.	.	Q	N	A	V	S	Q	A	K	L	F	H	E	A	V	G	L	T	G	I	T	L	T	K	L	D	G	T	A	K	G	G	.	.	.	.	.	.	.	.	.	.	V	I	F	S	V	A	D	Q	F	G
Query Conservation																												.	.	.																																.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.														.	.	.																																.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.
Template Sequence		W	F	A	E	R	.	.	.	.	.	.	.	.	V	D	L	I	I	L	L	F	D	A	H	K	L	E	I	S	D	E	F	S	E	A	I	G	A	L	R	G	H	E	D	K	I	R	V	V	L	N	K	A	D	M	V	E	T	Q	Q	L	M	R	V	Y	G	A	L	M	W	A	L	G	K	V	V	G	T	P	E
Template Known Secondary structure							.	.	.	.	.	.	.	.		S								T	T	S														T	T	T		G	G	G								G	G	G	S																							S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.									.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	I	R	Y	I	G	V	G	E	R	I	E	D	L	R	P	F	K	A	D	D	F	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	R	V	Y	I	G	S	F	W	S	Q	P	L	L	V	P	D	N	R	R	L	F	E	L
Template Known Secondary structure								S			S	S	S			S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions