Job Description P10121 Confidence 98.70% Date Thu Jan 5 11:32:03 GMT 2012 Rank 51 Aligned Residues 169 % Identity 21% Template c2ph1A_ PDB info PDB header:ligand binding protein Chain: A: PDB Molecule:nucleotide-binding protein; PDBTitle: crystal structure of nucleotide-binding protein af2382 from2 archaeoglobus fulgidus, northeast structural genomics target gr165 Resolution 2.70 Å

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		290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	A	P	F	V	I	L	M	V	.	G	V	N	G	V	G	K	T	T	T	I	G	K	L	A	R	Q	F	E	Q	Q	G	K	S	V	M	L	A	A	G	D	T	F	R	A	A	A	V	E	Q	L	Q	V	W	G	Q	R	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																																.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.
Template Sequence		G	K	I	K	S	R	I	A	V	X	S	G	K	G	G	V	G	K	S	T	V	T	A	L	L	A	V	H	Y	A	R	Q	G	K	K	V	G	I	L	D	A	D	.	F	L	G	P	S	I	P	I	L	F	G	L	R	N	A	R	I	A	V	S	A	E	G	L	E	P	V	L	T	Q	K	Y	G	I	K	V	X
Template Known Secondary structure		T	T		S								S	S	S		T	T															T	T										.	S	S								T	T			S							T	T								T	T	T
Template Predicted Secondary structure																																												.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
										349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	I	P	V	I	A	Q	H	T	G	A	D	S	A	S	V	I	F	D	A	I	Q	A	A	K	A	R	N	I	D	V	L	I	A	D	T	A	G	R	L	Q	N	K	S	H	L	M	E	E	L	K	K	I	V	R	V	M	K	K	L	D	V	E	A	P	H	E	V	M	L	T	I	D
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	X	Q	F	L	L	P	K	E	N	T	P	V	I	W	R	G	P	L	I	A	G	X	I	R	E	F	L	G	R	V	A	W	G	E	L	D	H	L	L	I	D	L	P	P	G	T	G	D	A	P	L	T	V	X	Q	D	A	K	P	.	.	.	.	.	.	.	.	.	.	.	.	T	G	V	V	V	V	S	T
Template Known Secondary structure			G	G	G	G	S	T	T		S	S						S													S	B				S		S								S	S	S	S	S												.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.													.	.	.	.	.	.	160	.
		421	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.			.	.	.	.									.	.	.	.	450	.	.	.	.	.			.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure						.																		.	.					.	.	.	.	.	.	.	.											.	.
Query SS confidence						.																		.	.					.	.	.	.	.	.	.	.											.	.
Query Sequence		A	S	T	G	.	Q	N	A	V	S	Q	A	K	L	F	H	E	A	V	G	L	T	.	.	G	I	T	L	.	.	.	.	.	.	.	.	T	K	L	D	G	T	A	K	G	G	.	.	V	I	F	S	V	A	D	Q	F	G	I	P	I	R	Y	I
Query Conservation						.																		.	.					.	.	.	.	.	.	.	.											.	.
Alig confidence						.																		.	.					.	.	.	.	.	.	.	.											.	.
Template Conservation
Template Sequence		P	Q	E	L	T	A	V	I	V	E	K	A	I	N	X	A	E	E	T	N	T	S	V	L	G	L	V	E	N	X	S	Y	F	V	C	P	N	C	G	H	K	S	Y	I	F	G	E	G	K	G	E	S	L	A	K	K	Y	N	I	G	F	F	T	S
Template Known Secondary structure		S	S	S															T	T	T									T	T						T	T	T						T	T												T	T		S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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