Job Description P10121 Confidence 98.78% Date Thu Jan 5 11:32:03 GMT 2012 Rank 44 Aligned Residues 158 % Identity 18% Template c2ozeA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:orf delta'; PDBTitle: the crystal structure of delta protein of psm19035 from2 streptoccocus pyogenes Resolution 1.83 Å

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		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		L	K	E	E	M	G	E	I	L	A	K	V	D	E	P	L	N	V	E	G	K	A	P	F	V	I	L	M	V	G	V	.	N	G	V	G	K	T	T	T	I	G	K	L	A	R	Q	F	E	Q	Q	G	K	S	V	M	L	A	A	G	D	T	F	R	A	A	A	V	E	Q	L	Q	V	W	G	Q	R	N	N	I
Query Conservation																																	.
Alig confidence												.	.	.	.	.	.	.	.														.																																.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.
Template Sequence		I	L	E	E	L	R	R	I	L	S	.	.	.	.	.	.	.	.	N	K	N	E	A	I	V	I	L	N	N	Y	F	K	G	G	V	G	K	S	K	L	S	T	M	F	A	Y	L	T	D	K	L	N	L	K	V	L	M	I	D	K	D	L	Q	.	.	.	.	.	.	.	.	A	T	L	T	K	D	L	A	K
Template Known Secondary structure												.	.	.	.	.	.	.	.				S									S	S	S	S	S	S															T	T										T	T	.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.									.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.									.	.	.	80	.	.	.	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.																																												.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	I	A	Q	H	T	G	A	D	S	A	S	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	A	I	Q	A	A	K	A	R	N	I	D	V	L	I	A	D	T	A	G	R
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																																																																																	.
Template Sequence		T	F	K	V	E	L	P	R	V	N	F	Y	E	G	L	K	N	G	N	L	A	S	S	I	V	H	L	T	D	N	L	D	L	I	P	G	T	F	D	L	M	L	L	P	K	L	T	R	S	W	T	F	E	N	E	S	R	L	L	A	T	L	L	A	P	L	K	S	D	Y	D	L	I	I	I	D	T	V	P	.
Template Known Secondary structure		T	S						S	S									T			G	G	G				S	S	S	S								G	G	G	G	G					T	T	T	S							T							G	G	G	G	G	G		S								S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.									.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure																																						.																	.	.	.	.	.	.	.	.
Query SS confidence																																						.																	.	.	.	.	.	.	.	.
Query Sequence		L	Q	N	K	S	H	L	M	E	E	L	K	K	I	V	R	V	M	K	K	L	D	V	E	A	P	H	E	V	M	L	T	I	D	A	S	.	T	G	Q	N	A	V	S	Q	A	K	L	F	H	E	A	V	.	.	.	.	.	.	.	.	G	L	T	G	I	T	L	T	K	L	D	G	T	A	K	G	G	V	I
Query Conservation																																						.																	.	.	.	.	.	.	.	.
Alig confidence		.													.	.	.	.	.	.	.	.	.	.	.	.												.																	.	.	.	.	.	.	.	.
Template Conservation		.													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	T	P	S	V	Y	T	N	N	A	I	V	A	.	.	.	.	.	.	.	.	.	.	.	.	S	D	Y	V	M	I	P	L	Q	A	E	E	E	S	T	N	N	I	Q	N	Y	I	S	Y	L	I	D	L	Q	E	Q	F	N	P	G	L	D	M	I	G	F	V	P	Y	L	V	D	T	D	S	A	T	I	K	S
Template Known Secondary structure		.	S		S										.	.	.	.	.	.	.	.	.	.	.	.		S								G	G	G																						T	T											S		T	T
Template Predicted Secondary structure		.													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			165	.	.	.	.	170	.	.	.	.	.	.													.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		458
Predicted Secondary structure
Query SS confidence
Query Sequence		F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		232

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions