Return to main results Retrieve Phyre Job Id

Job DescriptionP10121
Confidence97.33%DateThu Jan 5 11:32:03 GMT 2012
Rank259Aligned Residues149
% Identity15%Templatec2chgB_
PDB info PDB header:dna-binding proteinChain: B: PDB Molecule:replication factor c small subunit; PDBTitle: replication factor c domains 1 and 2
Resolution2.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   288.290.........300.........310.........320.........330.........340.........350.........360.......
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Query Sequence  VEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDA
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Template Sequence  VERKNIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERGIDVVRHKIKEFARTAPI. . . . . . . . . . . . . .
Template Known Secondary structure  TT


S
TTSSGGGTGGGTT
TT
TS

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   33......40.........50.........60.........70.........80.........90........
 
   368.370.........380.........390.........400.........410.........420.........430.........440.......
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Query Sequence  IQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTK
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Template Sequence  . . . . GGAPFKIIFLDEADALTADAQAALRRTMEMY. . . . . . . . . SKSCRFILSCNYVSRIIEPIQSRCA. . . . . VFRFKP
Template Known Secondary structure  ....TT
S
TGGGS
.........TTTS
GGGS
T.....


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   99100.........110.........120......... 130.........140.........150.... .....160
 
   448.450.........460........
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Query Sequence  LDGTAKGGVIFSVADQFGIPI
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Template Sequence  VPKEAMKKRLLEICEKEGVKI
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T
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   161........170.........180.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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