Job Description P10121 Confidence 97.35% Date Thu Jan 5 11:32:03 GMT 2012 Rank 253 Aligned Residues 124 % Identity 15% Template c1ymfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:genome polyprotein [contains: flavivirin PDBTitle: crystal structure of yellow fever virus ns3 helicase2 complexed with adp Resolution 2.60 Å

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		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.											.	.
Predicted Secondary structure																								.																																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.																																														.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	P	F	V	I	L	M	V	G	V	N	G	V	G	K	T	T	T	I	G	K	.	L	A	R	Q	F	E	Q	Q	G	K	S	V	M	L	A	A	G	D	T	F	R	A	A	A	V	E	Q	L	Q	V	W	G	Q	R	N	N	I	P	V	I	A	Q	H	T	G	.	.	.	.	.	.	.	.	.	.	A	D
Query Conservation																								.																																														.	.	.	.	.	.	.	.	.	.
Alig confidence																								.																		.	.																											.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.
Template Sequence		K	K	G	X	T	T	V	L	D	F	H	P	G	A	G	K	T	R	R	F	L	P	Q	I	L	A	E	C	A	R	R	R	L	R	T	L	V	L	A	P	.	.	T	R	V	V	L	S	E	X	K	E	A	F	H	G	L	D	V	K	F	H	T	Q	A	F	S	A	H	G	S	G	R	E	V	I	D	A	X	C
Template Known Secondary structure		S	T	T									T	T	S		T	T	T	T													T								S	.	.	S												T	T	S						S	S								S	S
Template Predicted Secondary structure																																										.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	S	V	I	F	D	A	I	Q	A	A	K	A	R	N	I	D	V	L	I	A	D	T	A	G	R	L	Q	N	K	S	H	L	M	E	E	L	K	K	I	V	R	V	M	K	K	L	D	V	E	A	P	H	E	V	M	L	T	I	D	A	S	T
Query Conservation
Alig confidence																											.	.																					.	.	.	.	.
Template Conservation																											.	.																					.	.	.	.	.
Template Sequence		H	A	T	L	T	Y	R	X	L	E	P	T	R	V	V	N	W	E	V	I	I	X	D	E	A	.	.	H	F	L	D	P	A	S	I	A	A	R	G	W	A	A	H	R	A	R	A	.	.	.	.	.	N	E	S	A	T	I	L	X	T	A	T	P
Template Known Secondary structure											S	S							S					T	T	T	.	.	T			S																T	.	.	.	.	.	T	S								S	S
Template Predicted Secondary structure																											.	.																					.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.						.	.	.	.	.	.	.	.	320	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions