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Job DescriptionP10121
Confidence97.79%DateThu Jan 5 11:32:03 GMT 2012
Rank173Aligned Residues160
% Identity17%Templatec1qvrB_
PDB info PDB header:chaperoneChain: B: PDB Molecule:clpb protein; PDBTitle: crystal structure analysis of clpb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   246...250.........260.........270.........280.........290.........300.........310.........320.....
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Query Sequence  RKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVM
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Template Sequence  REKLLRLEEELHKRVVGQDEAIRAVADAIRRARAG. . . . . LKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMI
Template Known Secondary structure  STTS
S
GGG.....TS
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SBSSSSSSSSGGG
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   546...550.........560.........570.........580 .........590.........600.........610.........620
 
   326...330.. .......340.........350.........360.........370.........380.........390.........400..
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Query Sequence  LAAGDTF. . . RAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVR
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Template Sequence  RIDMTEYMEKHAVSRLQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGR. . . LTDSHGRTVDFR. . . . . . . . . . .
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TTT

SSGGGGG


SSSSGGGS
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   621........630.........640.........650.........660.........670.... .....680......
 
   403......410.........420.........430.....
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Query Sequence  VMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFH
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Template Sequence  . . . . . . . . . . . NTVIILTSNLGSPLILEGLQKG
Template Known Secondary structure  ...........T

TTTT
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   701........710.........720..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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