Job Description P10121 Confidence 96.90% Date Thu Jan 5 11:32:03 GMT 2012 Rank 348 Aligned Residues 134 % Identity 17% Template c1lw7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcriptional regulator nadr; PDBTitle: nadr protein from haemophilus influenzae Resolution 2.90 Å

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		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.															.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.				.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Query Sequence		P	F	V	I	L	M	V	G	V	N	G	V	G	K	T	T	T	I	G	K	L	A	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	Q	Q	G	K	S	V	M	L	A	A	G	D	T	F	R	A	A	A	V	E	Q	L	Q	V	W	G	Q	.	.	.	R	N	N	I	P	V	I	A	Q	H
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation
Template Sequence		A	K	T	V	A	I	L	G	G	E	S	S	G	K	S	V	L	V	N	K	L	A	A	V	F	N	T	T	S	A	W	E	Y	G	R	E	F	V	F	E	K	L	G	G	D	E	Q	A	M	Q	Y	S	D	Y	P	Q	X	A	L	G	H	Q	R	Y	I	D	Y	A	V	R	H	S	H	K	I	A	F	I	D	T
Template Known Secondary structure											T	T	S													T	T							T	T							S	S	S	S		T	T	S	S		T	T	T																				S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.									.	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.														.
Query SS confidence														.	.	.	.	.	.	.	.														.
Query Sequence		T	G	A	D	S	A	S	V	I	F	D	A	.	.	.	.	.	.	.	.	I	Q	A	A	K	A	R	N	I	D	V	L	I	.	A	D	T	A	G	R	L	Q	N	K	S	H	L	M	E	E	L	K	K	I	V	R	V	M	K	K	L	D	V	E	A	P	H	E	V	M	L	T	I	D	A	S	T	G	Q	N
Query Conservation														.	.	.	.	.	.	.	.														.
Alig confidence														.	.	.	.	.	.	.	.														.																										.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.
Template Sequence		D	F	I	T	T	Q	A	F	C	I	Q	Y	E	G	K	A	H	P	F	L	D	S	X	I	K	E	Y	P	F	D	V	T	I	L	L	K	N	N	T	E	Q	K	Q	R	Q	Q	F	Q	Q	L	L	K	K	L	L	D	K	Y	K	.	.	.	.	.	.	.	.	V	P	Y	I	E	I	E	S	P	S	Y	L	D
Template Known Secondary structure															S													S			S													S														G	G	G	.	.	.	.	.	.	.	.									S	S
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.									.	.	.	.	.	370	.	.	.	.	.	.	.
		427	.	.	430	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	S	Q	A	K	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Y	N	Q	V	K	A	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions