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Job DescriptionP10121
Confidence97.08%DateThu Jan 5 11:32:03 GMT 2012
Rank312Aligned Residues97
% Identity25%Templatec1in8A_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:holliday junction dna helicase ruvb; PDBTitle: thermotoga maritima ruvb t158v
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   265....270.........280.........290.........300.........310.........320.........330.........340....
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Query Sequence  EALYGLLKEEMGEILAKVDEPLNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWG
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Template Sequence  ENVKKKLSLALEAAKM. . . . . . . . RGEVLDHVLLAGPPGLGKTTLA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HIIA
Template Known Secondary structure  ........T




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   31........40...... ...50.........60........ .70..
 
   345....350.........360.........370.........380.........390.........400..
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Query Sequence  QRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVR
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Template Sequence  SELQTNIHVTSG. PVLVKQGDMAAILTSLERGDVLFIDEIH. . RLNKAVEELLYSAIE
Template Known Secondary structure  T

T.TT

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TT
TGG..G

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   73......80.... .....90.........100.........110.. .......120.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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