Job Description P10121 Confidence 97.93% Date Thu Jan 5 11:32:03 GMT 2012 Rank 134 Aligned Residues 142 % Identity 15% Template c1g7cA_ PDB info PDB header:translation Chain: A: PDB Molecule:elongation factor 1-alpha; PDBTitle: yeast eef1a:eef1ba in complex with gdpnp Resolution 2.05 Å

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		291	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		K	A	P	F	V	.	I	L	M	V	G	V	N	G	V	G	K	T	T	T	I	G	K	L	A	R	Q	F	E	Q	Q	G	K	S	V	M	L	A	A	G	D	T	F	R	A	A	A	V	E	Q	L	Q	V	W	G	Q	R	N	N	I	P	V	I	A	Q	H	T	G	A	D	S	A	S	V	I	F	D	A	I	Q
Query Conservation							.
Alig confidence							.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Sequence		E	K	S	H	I	N	V	V	V	I	G	H	V	D	S	G	K	S	T	T	T	G	H	L	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	C	G	G	I	D	K	R	T	I	E	K	F	E	K	E	A	A	E	L	G	K	G	S	F	K	Y	.	.	.	.	.	A	W	V	L	D	K	L	K
Template Known Secondary structure														T	T	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.			S		S	S											G	G	G	G	S	S	S					.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.															30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.
		370	.	.	.															.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.
Query Sequence		A	A	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	I	D	V	L	I	A	D	T	A	G	R	L	Q	N	K	S	H	L	M	E	E	L	K	K	I	V	R	V	M	K	K	L	D	V	E	A	P	H	E	V	M	L	T	I	D	A	S	T	G	Q	N	A	.	.	.	.	.	.	.	.
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	R	E	R	G	I	T	I	D	I	A	L	W	K	F	E	T	P	K	Y	Q	V	T	V	I	D	A	P	G	H	R	D	F	I	K	N	M	I	T	G	T	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	A	D	C	A	I	L	I	I	A	G	G	V	G	E	F	E	A	G	I	S	K	D	G	Q
Template Known Secondary structure							T				S		S							S	S												T	T								S	S	.	.	.	.	.	.	.	.	.	.	.	.	S			S									S								T		T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.													.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.			.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		V	S	Q	A	K	L	F	H	E	A	V	G	L	T	G	I	T	L	.	.	T	K	L	D	G	T	A	K	G	G	V	I	F	S	V	A	D	Q
Query Conservation																				.	.
Alig confidence																				.	.
Template Conservation
Template Sequence		T	R	E	H	A	L	L	A	F	T	L	G	V	R	Q	L	I	V	A	V	N	K	M	D	S	V	K	W	D	E	S	R	F	Q	E	I	V	K
Template Known Secondary structure												T	T											T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions