Email l.a.kelley@imperial.ac.uk Description P25798 Date Thu Jan 5 11:42:39 GMT 2012 Unique Job ID a0377b43ee3f9501

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2y9jt_ 100.0 21 PDB header:protein transport Chain: T: PDB Molecule:protein prgh; PDBTitle: three-dimensional model of salmonella's needle complex at2 subnanometer resolution 2 c1yj7A_ 100.0 24 PDB header:protein transport Chain: A: PDB Molecule:escj; PDBTitle: crystal structure of enteropathogenic e.coli (epec) type iii secretion2 system protein escj 3 c2hfvA_ 92.5 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein rpa1041; PDBTitle: solution nmr structure of protein rpa1041 from pseudomonas2 aeruginosa. northeast structural genomics consortium3 target pat90. 4 d2hfva1 86.7 24 Fold:Ferredoxin-like Superfamily:GlnB-like Family:RPA1041-like 5 d1yqha1 80.7 13 Fold:Ferredoxin-like Superfamily:MTH1187/YkoF-like Family:MTH1187-like 6 d1lxna_ 79.1 23 Fold:Ferredoxin-like Superfamily:MTH1187/YkoF-like Family:MTH1187-like 7 d1vk8a_ 78.0 6 Fold:Ferredoxin-like Superfamily:MTH1187/YkoF-like Family:MTH1187-like 8 d1lxja_ 77.8 17 Fold:Ferredoxin-like Superfamily:MTH1187/YkoF-like Family:MTH1187-like 9 d2iboa1 71.4 8 Fold:Ferredoxin-like Superfamily:MTH1187/YkoF-like Family:MTH1187-like 10 c2epiA_ 63.4 5 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0045 protein mj1052; PDBTitle: crystal structure pf hypothetical protein mj1052 from2 methanocaldococcus jannascii (form 2) 11 c2rddB_ 60.4 19 PDB header:membrane protein/transport protein Chain: B: PDB Molecule:upf0092 membrane protein yajc; PDBTitle: x-ray crystal structure of acrb in complex with a novel2 transmembrane helix. 12 c1oy8A_ 54.5 12 PDB header:membrane protein Chain: A: PDB Molecule:acriflavine resistance protein b; PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump 13 c2flzC_ 53.9 12 PDB header:hydrolase Chain: C: PDB Molecule:cis-3-chloroacrylic acid dehalogenase; PDBTitle: the x-ray structure of cis-3-chloroacrylic acid dehalogenase (cis-2 caad) with a sulfate ion bound in the active site 14 d2yzca1 52.2 19 Fold:T-fold Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like Family:Urate oxidase (uricase) 15 d1b6ga_ 48.1 6 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Haloalkane dehalogenase 16 c2h7xA_ 47.9 21 PDB header:hydrolase Chain: A: PDB Molecule:type i polyketide synthase pikaiv; PDBTitle: pikromycin thioesterase adduct with reduced triketide2 affinity label 17 d2h7xa1 41.8 21 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Thioesterase domain of polypeptide, polyketide and fatty acid synthases 18 c3g7sA_ 40.8 22 PDB header:ligase Chain: A: PDB Molecule:long-chain-fatty-acid--coa ligase (fadd-1); PDBTitle: crystal structure of a long-chain-fatty-acid-coa ligase2 (fadd1) from archaeoglobus fulgidus 19 d2b61a1 40.4 18 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:O-acetyltransferase 20 c3hd7A_ 37.8 18 PDB header:exocytosis Chain: A: PDB Molecule:vesicle-associated membrane protein 2; PDBTitle: helical extension of the neuronal snare complex into the membrane,2 spacegroup c 1 2 1 21 c3n4dF_ not modelled 36.4 16 PDB header:hydrolase Chain: F: PDB Molecule:putative tautomerase; PDBTitle: crystal structure of cg10062 inactivated by(r)-oxirane-2-carboxylate 22 d1cr6a2 not modelled 35.1 15 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Epoxide hydrolase 23 c1zhvA_ not modelled 33.7 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein atu0741; PDBTitle: x-ray crystal structure protein atu0741 from agobacterium tumefaciens.2 northeast structural genomics consortium target atr8. 24 c2xuaH_ not modelled 33.2 0 PDB header:hydrolase Chain: H: PDB Molecule:3-oxoadipate enol-lactonase; PDBTitle: crystal structure of the enol-lactonase from burkholderia2 xenovorans lb400 25 d1otfa_ not modelled 33.0 14 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:4-oxalocrotonate tautomerase-like 26 d1zhva2 not modelled 32.8 19 Fold:Ferredoxin-like Superfamily:ACT-like Family:Atu0741-like 27 c3bf7B_ not modelled 32.5 26 PDB header:hydrolase Chain: B: PDB Molecule:esterase ybff; PDBTitle: 1.1 resolution structure of ybff, a new esterase from2 escherichia coli: a unique substrate-binding crevice3 generated by domain arrangement 28 c3etcB_ not modelled 31.7 14 PDB header:ligase Chain: B: PDB Molecule:amp-binding protein; PDBTitle: 2.1 a structure of acyl-adenylate synthetase from methanosarcina2 acetivorans containing a link between lys256 and cys298 29 d1gksa_ not modelled 30.1 10 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 30 d1r3da_ not modelled 29.8 19 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Hypothetical protein VC1974 31 c2yzbA_ not modelled 29.3 19 PDB header:oxidoreductase Chain: A: PDB Molecule:uricase; PDBTitle: crystal structure of uricase from arthrobacter globiformis2 in complex with uric acid (substrate) 32 c3lcrA_ not modelled 28.7 12 PDB header:hydrolase Chain: A: PDB Molecule:tautomycetin biosynthetic pks; PDBTitle: thioesterase from tautomycetin biosynthhetic pathway 33 c2aj1A_ not modelled 28.5 28 PDB header:hydrolase Chain: A: PDB Molecule:probable cadmium-transporting atpase; PDBTitle: solution structure of apocada 34 d1ic8a2 not modelled 28.2 15 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:POU-specific domain 35 c3l80A_ not modelled 27.0 9 PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein smu.1393c; PDBTitle: crystal structure of smu.1393c from streptococcus mutans ua159 36 c3gacD_ not modelled 26.8 13 PDB header:cytokine Chain: D: PDB Molecule:macrophage migration inhibitory factor-like PDBTitle: structure of mif with hpp 37 c1y37A_ not modelled 26.8 21 PDB header:hydrolase Chain: A: PDB Molecule:fluoroacetate dehalogenase; PDBTitle: structure of fluoroacetate dehalogenase from burkholderia sp. fa1 38 d1qlwa_ not modelled 26.2 39 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:A novel bacterial esterase 39 d1bjpa_ not modelled 26.1 25 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:4-oxalocrotonate tautomerase-like 40 c2kncB_ not modelled 25.9 30 PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-3; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex 41 c3fwtA_ not modelled 25.6 15 PDB header:cytokine Chain: A: PDB Molecule:macrophage migration inhibitory factor-like PDBTitle: crystal structure of leishmania major mif2 42 d1pg4a_ not modelled 25.6 17 Fold:Acetyl-CoA synthetase-like Superfamily:Acetyl-CoA synthetase-like Family:Acetyl-CoA synthetase-like 43 c3ol4B_ not modelled 25.5 23 PDB header:unknown function Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a putative uncharacterized protein from2 mycobacterium smegmatis, an ortholog of rv0543c 44 d1mo2a_ not modelled 25.3 22 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Thioesterase domain of polypeptide, polyketide and fatty acid synthases 45 c1mo2A_ not modelled 25.3 22 PDB header:transferase Chain: A: PDB Molecule:erythronolide synthase, modules 5 and 6; PDBTitle: thioesterase domain from 6-deoxyerythronolide synthase2 (debs te), ph 8.5 46 c3ry0A_ not modelled 25.1 25 PDB header:isomerase Chain: A: PDB Molecule:putative tautomerase; PDBTitle: crystal structure of tomn, a 4-oxalocrotonate tautomerase homologue in2 tomaymycin biosynthetic pathway 47 c3fobA_ not modelled 25.1 0 PDB header:oxidoreductase Chain: A: PDB Molecule:bromoperoxidase; PDBTitle: crystal structure of bromoperoxidase from bacillus anthracis 48 d2rhwa1 not modelled 24.7 0 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Carbon-carbon bond hydrolase 49 c1j2gC_ not modelled 24.6 10 PDB header:oxidoreductase Chain: C: PDB Molecule:uricase; PDBTitle: crystal structure of urate oxidase from bacillus sp. tb-90 co-2 crystallized with 8-azaxanthine 50 c2xmzA_ not modelled 24.6 10 PDB header:lyase Chain: A: PDB Molecule:hydrolase, alpha/beta hydrolase fold family; PDBTitle: structure of menh from s. aureus 51 c2vavL_ not modelled 24.3 13 PDB header:transferase Chain: L: PDB Molecule:acetyl-coa--deacetylcephalosporin c PDBTitle: crystal structure of deacetylcephalosporin c2 acetyltransferase (dac-soak) 52 d2hmfa2 not modelled 23.0 8 Fold:Ferredoxin-like Superfamily:ACT-like Family:Aspartokinase allosteric domain-like 53 c2xczA_ not modelled 22.5 13 PDB header:immune system Chain: A: PDB Molecule:possible atls1-like light-inducible protein; PDBTitle: crystal structure of macrophage migration inhibitory factor2 homologue from prochlorococcus marinus 54 d1u1ia1 not modelled 22.3 12 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 55 c2op8A_ not modelled 21.8 33 PDB header:isomerase Chain: A: PDB Molecule:probable tautomerase ywhb; PDBTitle: crystal structure of ywhb- homologue of 4-oxalocrotonate tautomerase 56 d1uaaa2 not modelled 21.6 20 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 57 c2kt2A_ not modelled 21.4 22 PDB header:oxidoreductase Chain: A: PDB Molecule:mercuric reductase; PDBTitle: structure of nmera, the n-terminal hma domain of tn501 mercuric2 reductase 58 d1eh1a_ not modelled 21.0 16 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 59 d2vata1 not modelled 20.8 13 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:O-acetyltransferase 60 c1yy7A_ not modelled 20.4 21 PDB header:transcription Chain: A: PDB Molecule:stringent starvation protein a; PDBTitle: crystal structure of stringent starvation protein a (sspa),2 an rna polymerase-associated transcription factor 61 d1is1a_ not modelled 20.3 11 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 62 c1cr6A_ not modelled 20.2 18 PDB header:hydrolase Chain: A: PDB Molecule:epoxide hydrolase; PDBTitle: crystal structure of murine soluble epoxide hydrolase2 complexed with cpu inhibitor 63 c2ronA_ not modelled 20.1 20 PDB header:hydrolase Chain: A: PDB Molecule:surfactin synthetase thioesterase subunit; PDBTitle: the external thioesterase of the surfactin-synthetase 64 d1dd5a_ not modelled 20.0 5 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 65 c3mlcC_ not modelled 20.0 13 PDB header:isomerase Chain: C: PDB Molecule:fg41 malonate semialdehyde decarboxylase; PDBTitle: crystal structure of fg41msad inactivated by 3-chloropropiolate 66 c2kkhA_ not modelled 19.8 17 PDB header:metal transport Chain: A: PDB Molecule:putative heavy metal transporter; PDBTitle: structure of the zinc binding domain of the atpase hma4 67 d1w36b2 not modelled 19.7 16 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 68 d1z3ea1 not modelled 19.4 19 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:ArsC-like 69 d1uk8a_ not modelled 19.1 5 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Carbon-carbon bond hydrolase 70 c2cjpA_ not modelled 18.7 21 PDB header:hydrolase Chain: A: PDB Molecule:epoxide hydrolase; PDBTitle: structure of potato (solanum tuberosum) epoxide hydrolase i2 (steh1) 71 d1ek8a_ not modelled 18.7 13 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 72 c2f06B_ not modelled 18.3 6 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of protein bt0572 from bacteroides thetaiotaomicron 73 c3qyjB_ not modelled 18.2 11 PDB header:hydrolase Chain: B: PDB Molecule:alr0039 protein; PDBTitle: crystal structure of alr0039, a putative alpha/beta hydrolase from2 nostoc sp pcc 7120. 74 c2rogA_ not modelled 18.2 16 PDB header:metal binding protein Chain: A: PDB Molecule:heavy metal binding protein; PDBTitle: solution structure of thermus thermophilus hb8 ttha17182 protein in living e. coli cells 75 c3b64A_ not modelled 18.2 14 PDB header:cytokine Chain: A: PDB Molecule:macrophage migration inhibitory factor-like PDBTitle: macrophage migration inhibitory factor (mif) from2 /leishmania major 76 d1a8qa_ not modelled 18.0 13 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Haloperoxidase 77 c3h3yF_ not modelled 17.8 12 PDB header:viral protein Chain: F: PDB Molecule:baseplate structural protein gp6; PDBTitle: fitting of the gp6 crystal structure into 3d cryo-em2 reconstruction of bacteriophage t4 star-shaped baseplate 78 c3a2nF_ not modelled 17.4 11 PDB header:hydrolase Chain: F: PDB Molecule:haloalkane dehalogenase; PDBTitle: crystal structure of dbja (wild type type ii p21) 79 c2g29A_ not modelled 17.3 10 PDB header:transport protein Chain: A: PDB Molecule:nitrate transport protein nrta; PDBTitle: crystal structure of the periplasmic nitrate-binding2 protein nrta from synechocystis pcc 6803 80 d1osda_ not modelled 17.2 17 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 81 c2k2pA_ not modelled 17.1 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu1203; PDBTitle: solution nmr structure of protein atu1203 from agrobacterium2 tumefaciens. northeast structural genomics consortium (nesg) target3 att10, ontario center for structural proteomics target atc1183 82 c3l78A_ not modelled 17.0 17 PDB header:transcription Chain: A: PDB Molecule:regulatory protein spx; PDBTitle: the crystal structure of smu.1142c from streptococcus mutans ua159 83 d1gyxa_ not modelled 17.0 16 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:4-oxalocrotonate tautomerase-like 84 c3mb2G_ not modelled 17.0 25 PDB header:isomerase Chain: G: PDB Molecule:4-oxalocrotonate tautomerase family enzyme - alpha subunit; PDBTitle: kinetic and structural characterization of a heterohexamer 4-2 oxalocrotonate tautomerase from chloroflexus aurantiacus j-10-fl:3 implications for functional and structural diversity in the4 tautomerase superfamily 85 d1sb6a_ not modelled 16.6 10 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 86 d2aw0a_ not modelled 16.4 33 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 87 c2dahA_ not modelled 16.2 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquilin-3; PDBTitle: solution structure of the c-terminal uba domain in the2 human ubiquilin 3 88 c2l3mA_ not modelled 16.2 21 PDB header:metal binding protein Chain: A: PDB Molecule:copper-ion-binding protein; PDBTitle: solution structure of the putative copper-ion-binding protein from2 bacillus anthracis str. ames 89 d2qifa1 not modelled 16.1 16 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 90 d2pl5a1 not modelled 16.1 6 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:O-acetyltransferase 91 d2ddha2 not modelled 16.0 23 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:acyl-CoA oxidase C-terminal domains 92 d1q8la_ not modelled 16.0 20 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 93 c1yg0A_ not modelled 16.0 17 PDB header:metal transport Chain: A: PDB Molecule:cop associated protein; PDBTitle: solution structure of apo-copp from helicobacter pylori 94 d1n6za_ not modelled 15.8 15 Fold:Hypothetical protein Yml108w Superfamily:Hypothetical protein Yml108w Family:Hypothetical protein Yml108w 95 c1sr9A_ not modelled 15.7 22 PDB header:transferase Chain: A: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of leua from mycobacterium tuberculosis 96 c2l9bA_ not modelled 15.6 19 PDB header:transcription Chain: A: PDB Molecule:mrna 3'-end-processing protein rna15; PDBTitle: heterodimer between rna14p monkeytail domain and rna15p hinge domain2 of the yeast cf ia complex 97 c3fsgC_ not modelled 15.6 5 PDB header:hydrolase Chain: C: PDB Molecule:alpha/beta superfamily hydrolase; PDBTitle: crystal structure of alpha/beta superfamily hydrolase from oenococcus2 oeni psu-1 98 d1pyya1 not modelled 15.4 13 Fold:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Superfamily:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Family:Penicillin-binding protein 2x (pbp-2x), c-terminal domain 99 d2i52a1 not modelled 15.4 17 Fold:MK0786-like Superfamily:MK0786-like Family:MK0786-like