Job Description P25798 Confidence 17.78% Date Thu Jan 5 11:42:39 GMT 2012 Rank 77 Aligned Residues 110 % Identity 12% Template c3h3yF_ PDB info PDB header:viral protein Chain: F: PDB Molecule:baseplate structural protein gp6; PDBTitle: fitting of the gp6 crystal structure into 3d cryo-em2 reconstruction of bacteriophage t4 star-shaped baseplate Resolution 16.00 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.						.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.
Query SS confidence																																			.	.	.	.	.
Query Sequence		F	V	R	E	Q	K	S	P	S	A	S	V	T	V	N	L	L	P	G	R	A	L	D	E	G	Q	I	S	A	I	V	H	L	.	.	.	.	.	V	S	S	A	V	A	G	L	P	P	G	N	V	T	L	V	D	Q	G	G	H	L	L	T	Q	S	N	T	S	G	R	D	L	N	D	A	Q	L	K	Y	A	S
Query Conservation																																			.	.	.	.	.
Alig confidence																																			.	.	.	.	.
Template Conservation
Template Sequence		F	T	D	S	T	K	P	G	Y	A	F	I	A	A	K	P	K	S	G	L	Y	L	T	T	V	Q	R	E	D	I	K	N	Y	L	K	D	Y	N	L	A	P	I	T	P	S	I	I	S	P	N	Y	L	F	I	K	T	N	L	K	V	T	Y	A	L	N	K	L	Q	E	S	E	Q	W	L	E	G	Q	I	I	D
Template Known Secondary structure					T	T	S	T	T									S	S	S	S												T	T	T	T	T	S				S																							S	T	T			S
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
		237	.	.	240	.	.	.	.	.	.										.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.
Query Sequence		D	V	E	G	R	I	Q	R	R	I	.	.	.	.	.	.	.	.	.	E	A	I	L	S	P	I	V	G	N	G	N	I	H	A	Q	V	T	A	Q	L	D	F	A	S
Query Conservation												.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	D	R	Y	Y	T	E	D	V	E	I	F	N	S	S	F	A	K	S	K	M	L	T	Y	V	D	D	A	D	H	S	V	I	G	S	S	A	T	I	Q	M	V	R
Template Known Secondary structure											T	S	S	T	T														T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions