Job Description P25798 Confidence 100.00% Date Thu Jan 5 11:42:39 GMT 2012 Rank 2 Aligned Residues 148 % Identity 24% Template c1yj7A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:escj; PDBTitle: crystal structure of enteropathogenic e.coli (epec) type iii secretion2 system protein escj Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		R	T	L	F	S	N	L	S	D	Q	D	G	G	A	I	V	S	Q	L	T	Q	M	N	I	P	Y	R	F	S	E	A	S	G	.	.	.	A	I	E	V	P	A	D	K	V	H	E	L	R	L	R	L	A	Q	Q	G	L	P	K	G	G	A	V	G	F	E	L	L	D	Q	E	K	F	G	I	S	Q	F	S	E
Query Conservation																																			.	.	.
Alig confidence																																			.	.	.																															.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.
Template Sequence		E	Q	L	Y	T	G	L	T	E	K	E	A	N	Q	M	Q	A	L	L	L	S	N	D	V	N	V	S	K	E	M	D	K	S	G	N	M	T	L	S	V	A	A	A	D	F	V	R	A	I	T	I	L	N	N	N	G	F	P	K	K	K	F	A	D	I	E	.	.	.	.	.	V	I	F	P	S	P	S	Q	E
Template Known Secondary structure																							T	T									T	T	S								G	G	G											T	T		S									.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.						.	.	90	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	N	Y	Q	R	A	L	E	G	E	L	S	R	T	I	E	T	I	G	P	V	K	G	A	R	V	H	L	A	M	P	K	P	S	L	F	V	R	E	Q	K	S	P	S	A	S	V	T	V	N	L	L	P	G	R	A	L	D	E	G	Q	I	S	A	I	V	H	L	V	S	S	A	V	A	G	L	P	P	G
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		N	A	K	I	N	Y	L	K	E	Q	D	I	E	R	L	L	S	K	I	P	G	V	I	D	C	S	V	S	L	N	V	S	.	.	.	.	.	.	.	.	.	.	.	.	S	A	A	V	L	V	I	S	S	P	E	V	N	L	A	P	.	S	V	I	Q	I	K	N	L	V	K	N	S	V	D	D	L	K	L	E
Template Known Secondary structure																		T	T	S	T	T												.	.	.	.	.	.	.	.	.	.	.	.										T	T				G	G	.	G												S	T	T			G	G
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.													.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	T	L	V	D	Q	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	S	V	V	I	K	S	S
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions