Job Description P60293 Confidence 24.22% Date Thu Jan 5 12:06:42 GMT 2012 Rank 72 Aligned Residues 96 % Identity 9% Template d2frha1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators Resolution 2.50

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	Q	T	V	P	E	L	V	A	W	A	R	K	N	D	F	S	I	S	L	P	V	D	R	L	S	F	L	L	A	V	A	T	L	N	G	E	R	L	D	G	E	M	S	E	G	E	L	V	D	A	F	R	H	V	S	D	A	F	E	Q	T	S	E	T	I	G	V	R	A	N	N	A	I	N	D	M	V	R
Query Conservation
Alig confidence																	.	.	.																				.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.																				.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	V	T	Y	A	D	K	L	K	S	L	I	K	K	E	.	.	.	F	S	I	S	F	E	E	F	A	V	L	T	Y	I	S	E	N	K	E	.	.	.	.	K	E	Y	Y	L	K	D	I	I	N	H	L	N	.	.	.	.	.	.	.	.	.	.	.	Y	K	Q	P	Q	V	V	K	A	V	K	I	L	S	Q
Template Known Secondary structure																T	.	.	.	T																T			.	.	.	.	S											S	S	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																	.	.	.																				.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.	.	.	.	160	.												.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	L	L	N	R	F	T	S	E	Q	A	E	G	N	A	I	Y	R	L	T	P	L	G	I	G	I	T	D	Y	Y	I	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	Y	F	D	K	K	R	N	E	H	D	E	R	T	V	L	I	L	V	N	A	Q	Q	R	K	K	I	E	S	L	L	S	R
Template Known Secondary structure		T	T	S	S			B			S	S	S	S									S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions