Return to main results Retrieve Phyre Job Id

Job DescriptionP60293
Confidence38.51%DateThu Jan 5 12:06:42 GMT 2012
Rank44Aligned Residues76
% Identity20%Templated2fbha1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70.........80.........90.........100
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  SISLPVDRLSFLLAVATLNGERLDGEMSEGELVDAFRHVSDAFEQTSETIGVRANNAINDMVRQRLLNRFTSEQAEGNAI
Query Conservation 

 
    
 

 
 
    
    
  
  
 
 

 
        

   





  






 
      
    
Alig confidence 



















.....











...........































Template Conservation    


     

  
     .....  
  


  
 ...........     

  
  
   
 
 
     
 
   
Template Sequence  HLGLSQARWLVLLHLARHRD. . . . . SPTQRELAQSVG. . . . . . . . . . . VEGPTLARLLDGLESQGLVRRLAVAEDRRAKH
Template Known Secondary structure  GG

TTT
SS.....

BT...........

TTS

BTTB
S
Template Predicted Secondary structure 






.....



...........
















Template SS confidence 















































































   30.........40......... 50.........60. ........70.........80.........90...
 
   101........110..
Predicted Secondary structure 
Query SS confidence 











Query Sequence  YRLTPLGIGITD
Query Conservation 



 

  
  
Alig confidence 











Template Conservation 
 

  
     
Template Sequence  IVLTPKADVLIA
Template Known Secondary structure 
TT
Template Predicted Secondary structure 
Template SS confidence 











   94.....100.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions