Job Description P60293 Confidence 42.07% Date Thu Jan 5 12:06:42 GMT 2012 Rank 42 Aligned Residues 73 % Identity 16% Template d1ghca_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Linker histone H1/H5 Resolution UNK

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	L	P	V	D	R	L	S	F	L	L	A	V	A	T	L	N	G	E	R	L	D	G	E	M	S	E	G	E	L	V	D	A	F	R	H	V	S	D	A	F	E	Q	T	S	E	T	I	G	V	R	A	N	N	A	I	N	D	M	V	R	Q	R	L	L	N	R	F	T	S	E	Q	A	E	G	N	A	I	Y
Query Conservation
Alig confidence																					.								.	.	.	.	.											.																																.	.
Template Conservation																					.								.	.	.	.	.											.																																.	.
Template Sequence		M	A	G	P	S	V	T	E	L	I	T	K	A	V	S	A	S	K	E	.	R	K	G	L	S	L	A	.	.	.	.	.	A	L	K	K	A	L	A	A	G	G	.	Y	D	V	E	K	N	N	S	R	I	K	L	G	L	K	S	L	V	S	K	G	T	L	V	Q	T	K	G	T	G	A	.	.	S	G	S	F
Template Known Secondary structure				S	S	S													S	S	.	S	S			T	T	S	.	.	.	.	.	S	G	G	G	S	S	S	S	S	S	.			S	S	S	S								T	T	T					T	S	S						S	T	T	.	.	S
Template Predicted Secondary structure																					.								.	.	.	.	.											.																																.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.
		102	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		72	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions