Return to main results Retrieve Phyre Job Id

Job DescriptionP60293
Confidence67.99%DateThu Jan 5 12:06:42 GMT 2012
Rank17Aligned Residues98
% Identity17%Templatec3hruA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:metalloregulator scar; PDBTitle: crystal structure of scar with bound zn2+
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100.........110
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  FLLAVATLNGERLDGEMSEGELVDAFRHVSDAFEQTSETIGVRANNAINDMVRQRLLNRFTSEQAEGNAIYRLTPLGIGI
Query Conservation 

 
 
    
    
  
  
 
 

 
        

   





  






 
      
    



 

  
Alig confidence 











....









...........





















......














Template Conservation 

  
  
    ....     

  
........... 

  


  
  
   


  ......     
 

  
   
Template Sequence  YLKCLYELGTNK. . . . ITNKEIAQLM. . . . . . . . . . . QVSPPAVTEMMKKLLAEELLIK. . . . . . DKKAGYLLTDLGLKL
Template Known Secondary structure  T


....

T...........T

TTS......TTT
Template Predicted Secondary structure 




....

...........





......







Template SS confidence 















































































   8.10......... 20......... 30.........40.........50. ........60......
 
   111........120.........130.........140.........
Predicted Secondary structure 



Query SS confidence 






































Query Sequence  TDYYIRQREFSTLRLSMQLSIVAGELKRAADAAEEGGDE
Query Conservation    

    


   

 
   
  

     

 
    
Alig confidence 






































Template Conservation 
  
 
 


 
 

   

         
  


  
 
Template Sequence  VSDLYRKHRLIEVFLVHHLGYTTEEIHEEAEVLEHTVSD
Template Known Secondary structure 


TTS
Template Predicted Secondary structure 








Template SS confidence 






































   6970.........80.........90.........100.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions