Job Description P27125 Confidence 5.68% Date Thu Jan 5 11:43:12 GMT 2012 Rank 11 Aligned Residues 136 % Identity 13% Template c1ymgA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:lens fiber major intrinsic protein; PDBTitle: the channel architecture of aquaporin o at 2.2 angstrom resolution Resolution 2.24 Å

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		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.															.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	I	A	I	G	I	T	L	I	V	G	T	L	M	T	P	I	I	N	G	N	F	D	V	L	I	S	T	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	M	T	L	L	G	V	L	V	A	L	I	G	V	G	I	V	T	R	A	G	Q	L	K	E	R	K	M	G	I	K	A	E	E
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.
Template Sequence		A	I	C	Y	M	V	A	Q	L	L	G	A	V	A	G	A	A	V	L	Y	S	V	T	P	P	A	V	R	G	N	L	A	L	N	T	L	H	P	G	V	S	V	G	Q	A	T	I	V	E	I	F	L	T	L	Q	F	V	L	C	I	F	A	T	Y	D	.	.	.	.	.	.	E	R	R	N	G	R	L	G	S
Template Known Secondary structure																								S		T	T	T		T	T	T	T						T	T	S																										.	.	.	.	.	.	T	T	S		S
Template Predicted Secondary structure																																																																			.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150							.	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	L	K	K	G	L	V	L	A	V	M	C	G	I	F	S	A	G	M	S	F	A	M	N	A	A	K	P	M	H	E	A	A	A	A	L	G	V	D	P	L	Y	V	A	L	P	S	Y	V	V	I	M	G	G	G	A	I	I	N	L	G	F	C	F	I	R	L	A	K	V	K	D	L	S	L	K	A	D
Query Conservation
Alig confidence																																.	.	.
Template Conservation																																.	.	.
Template Sequence		V	A	L	A	V	G	F	S	L	T	L	G	H	L	F	G	M	Y	Y	T	G	A	G	M	N	P	A	R	S	F	.	.	.	A	P	A	I	L	T	R	N	F	T	N	H	W	V	Y	W	V	G	P	V	I	G	A	G	L	G	S	L	L	Y	D	F	L	L	F	P	R	L	K	S	V	S	E	R	L	S
Template Known Secondary structure																																.	.	.							T			T	T	T	T																			T	T	T	S
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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