Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADE4
Confidence2.43%DateThu Jan 5 11:20:47 GMT 2012
Rank91Aligned Residues47
% Identity2%Templatec3h6nA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:plexin-d1; PDBTitle: crystal structure of the ubiquitin-like domain of plexin d1
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160.........170. ........180.
Predicted Secondary structure 















.



Query SS confidence 




































.









Query Sequence  TVLNQGDYENFKKSLTSIALRKGYFDSEFTKAQLGIA. LGLHKAFWDI
Query Conservation                
       

  
        

.       
  
Alig confidence 




































.









Template Conservation 

















 

  
 
 

   






 
  
  

Template Sequence  RAXDTDTLTQVKEKILEAFCKNVPYSQWPRAEDVDLEWFASSTQSYIL
Template Known Secondary structure  TTSBSTTS
GGGS

GGG
SSS

Template Predicted Secondary structure 
















Template SS confidence 















































   1573......1580.........1590.........1600.........1610.........1620
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions