Job Description P0ADE4 Confidence 2.43% Date Thu Jan 5 11:20:47 GMT 2012 Rank 89 Aligned Residues 236 % Identity 11% Template c2qomB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:serine protease espp; PDBTitle: the crystal structure of the e.coli espp autotransporter beta-domain. Resolution 2.66 Å

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		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.			.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		K	N	P	L	E	Q	Y	Y	L	V	Q	G	G	F	K	R	T	D	L	N	D	T	E	S	D	S	T	T	L	V	A	S	R	Y	W	D	L	S	S	G	W	Q	R	A	I	N	L	R	W	S	L	D	H	F	T	Q	G	E	I	T	N	T	T	M	L	F	Y	P	G	V	M	I	.	.	S	R	T	R	S	R
Query Conservation																																																																										.	.
Alig confidence																																																																										.	.
Template Conservation
Template Sequence		L	R	D	E	A	G	A	W	A	R	I	M	S	G	T	G	S	A	S	G	G	F	S	D	N	Y	T	H	V	Q	V	G	V	D	K	K	H	E	L	G	L	D	L	F	T	G	F	T	V	T	H	T	D	S	S	A	S	A	D	V	F	S	G	K	T	K	S	V	G	A	G	L	Y	A	S	A	M	F	D	S
Template Known Secondary structure																				S	T	T																																						S	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		1032	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	L	M	P	T	W	G	D	S	Q	R	Y	S	I	D	Y	S	N	T	A	W	G	S	D	V	D	F	S	V	F	Q	A	Q	N	V	W	I	R	T	L	Y	D	R	H	R	F	V	T	R	G	T	L	G	W	I	E	T	G	D	F	D	K	V	P	P	D	L	R	F	F	A	G	G	D	R	S	I	R	G
Query Conservation
Alig confidence																																																																	.	.	.
Template Conservation																																																																	.	.	.
Template Sequence		G	A	Y	I	D	L	I	G	K	Y	V	H	H	D	N	E	Y	T	A	T	F	A	T	R	D	Y	S	T	H	S	W	Y	A	G	A	E	A	G	Y	R	Y	H	V	T	E	D	A	W	I	E	P	Q	A	E	L	V	Y	G	S	V	S	G	K	.	.	.	Q	F	A	W	K	D	G	M	H	L	S	M	K	D
Template Known Secondary structure		S																			S																									T	T																		.	.	.				B					S	B
Template Predicted Secondary structure																																																																	.	.	.
Template SS confidence
		1116	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.				.	1180	.	.	.	.	.	.	.	.	.	1190	.	.
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.																		.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	K	Y	K	S	I	A	P	K	Y	A	N	G	D	L	K	G	A	S	K	L	I	T	G	S	L	E	Y	Q	Y	N	V	T	G	K	W	W	G	A	V	F	V	D	S	G	E	A	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	R	R	S	D	F	K	T	G	T	G	V	G
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	Y	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	G	R	T	G	V	D	V	G	K	S	F	S	G	K	W	K	V	T	A	R	A	G	L	G	Y	Q	F	D	L	L	A	N	G	E	T	V	L	R	D	A	S	G	E	K	R	I	K	G	E	K	D	S	R	M	L	M	S	V	G
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		T		T	T	B				T	T	S	S			S	S	S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1197	.	.	1200	.															.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.
		542	.	.	.		.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		V	R	W	E	.	S	P	V	G	P	I	K	L	D	F	A	V	P	V	A	D	K	D	E	H	G	L	Q	F	Y	I	G	L
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		L	N	A	E	I	R	D	N	V	R	F	G	L	E	F	E	K	S	A	F	G	K	Y	N	V	D	N	A	V	N	A	N	F
Template Known Secondary structure							T	T	T					.							S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		1264	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions