Job Description P0ADE4 Confidence 99.97% Date Thu Jan 5 11:20:47 GMT 2012 Rank 5 Aligned Residues 229 % Identity 16% Template c2qczA_ PDB info PDB header:membrane protein, protein transport Chain: A: PDB Molecule:outer membrane protein assembly factor yaet; PDBTitle: structure of n-terminal domain of e. coli yaet Resolution 2.70 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		R	L	Q	V	E	G	L	S	G	Q	L	E	K	N	V	R	A	Q	L	S	T	I	E	S	D	E	V	T	P	D	.	R	R	F	R	A	R	V	D	D	A	I	R	E	G	L	K	A	L	G	Y	Y	Q	P	T	I	E	F	D	L	R	P	P	P	K	K	G	R	Q	V	L	I	A	K	V	T	P	G	V	P
Query Conservation																																.
Alig confidence																																.																															.
Template Conservation																																																															.
Template Sequence		S	I	T	F	S	G	N	K	S	V	K	D	D	M	L	K	Q	N	L	E	A	S	G	V	R	V	G	E	S	L	D	R	T	T	I	A	D	I	E	K	G	L	E	D	F	Y	Y	S	V	G	K	Y	S	A	S	V	K	A	V	V	T	.	P	L	P	R	N	R	V	D	L	K	L	V	F	Q	E	G	V	S
Template Known Secondary structure							S		S	S	S												T	T			T	T	S	B			T	T													G	G	G	G	T		T	T									.			S	S	S
Template Predicted Secondary structure																																																															.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	I	G	G	T	D	V	V	L	R	G	G	A	R	T	D	K	D	Y	L	K	L	L	D	T	R	P	A	I	G	T	V	L	N	Q	G	D	Y	E	N	F	K	K	S	L	T	S	I	A	L	R	K	G	Y	F	D	S	E	F	T	K	A	Q	L	G	I	A	L	G	L	H	K	A	F	W	D	I	D	Y
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	I	Q	Q	I	N	I	V	G	N	H	A	F	T	T	D	E	L	.	.	.	.	.	.	.	.	.	.	.	I	S	H	F	Q	L	Q	K	L	A	G	D	L	E	T	L	R	S	Y	Y	L	D	R	G	Y	A	R	F	N	I	D	S	T	Q	V	S	L	T	P	D	K	K	G	I	Y	V	T	V	N	I
Template Known Secondary structure											S		S	S	S						.	.	.	.	.	.	.	.	.	.	.		T	T	T																		T	T	T		T	T												T	T	S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.												.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.					.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.			.
Query SS confidence																																																				.	.	.	.			.
Query Sequence		N	S	G	E	R	Y	R	F	G	H	V	T	F	E	G	S	Q	I	R	D	E	Y	L	Q	N	L	V	P	F	K	E	G	D	E	Y	E	S	K	D	L	A	E	L	N	R	R	L	S	A	T	.	.	.	.	G	W	.	F	N	S	V	V	V	A	P	Q	F	D	K	A	R	E	T	K	V	L	P	L	T	G
Query Conservation																																																				.	.	.	.			.
Alig confidence																																																				.	.	.	.			.												.	.	.	.
Template Conservation																																																																						.	.	.	.
Template Sequence		T	E	G	D	Q	Y	K	L	S	G	V	E	V	S	G	N	L	A	G	H	S	A	E	I	E	Q	L	T	K	E	P	G	E	L	Y	N	G	T	K	V	T	K	M	E	D	D	I	K	K	L	L	G	R	Y	G	Y	A	Y	P	R	V	Q	S	M	P	E	I	N	.	.	.	.	D	A	T	V	K	L	R	V
Template Known Secondary structure								B								S	S			S													S		B			S																T	T	T	B	S	S											.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.					.	330	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	S	P	R	T	E	N	T	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V	D	A	G	N	R	F	Y	V	R
Template Known Secondary structure								B
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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