Job Description P19931 Confidence 97.39% Date Thu Jan 5 11:37:40 GMT 2012 Rank 213 Aligned Residues 80 % Identity 25% Template c3gv1A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:disulfide interchange protein; PDBTitle: crystal structure of disulfide interchange protein from neisseria2 gonorrhoeae Resolution 2.00 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	D	G	V	V	L	L	S	S	D	P	K	R	T	P	E	V	S	D	N	P	V	M	I	G	E	L	L	R	E	F	P	D	Y	T	W	Q	V	A	I	A	D	L	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.														.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.														.	.	.	.
Template Sequence		N	G	K	L	K	V	A	V	F	S	D	P	D	.	C	P	F	C	K	R	L	E	H	E	F	E	K	.	.	.	.	X	T	D	V	T	V	Y	S	F	X	X	P	I	A	G	L	H	P	D	A	A	R	K	A	Q	I	L	W	C	Q	P	D	R	A	K	A	W	T	D	W	X	R	K	G	K	F	P	V	G
Template Known Secondary structure		T											T	T	.												T	T	.	.	.	.			S											T	T	T		T	T										T	S	S	S																T	T
Template Predicted Secondary structure															.														.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
												80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	S	E	A	I	G	D	R	F	G	V	F	R	F	P	A	T	L	V	F	T	G	G	N	Y	R	G	V	L	N	G	I	H	P	W	A	E	L	I	N	L	M	R	G
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																			.					.	.	.
Template Conservation																														.					.	.	.
Template Sequence		G	S	I	C	D	N	P	V	A	E	T	T	S	L	G	E	Q	F	G	F	N	G	T	P	T	L	V	F	.	P	N	G	R	.	.	.	T	Q	S	G	Y	S	P	X	P	Q	L	E	E	I	I	R	K
Template Known Secondary structure						S		S											T	T			S	S						.	T	T	S		.	.	.				S				T	T
Template Predicted Secondary structure																														.					.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions