Job Description P19931 Confidence 98.08% Date Thu Jan 5 11:37:40 GMT 2012 Rank 169 Aligned Residues 89 % Identity 19% Template c3feuA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative lipoprotein; PDBTitle: crystal structure of dsba-like thioredoxin domain vf_a0457 from vibrio2 fischeri Resolution 1.76 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	P	D	G	V	V	L	L	S	S	D	P	K	R	T	P	E	V	S	D	N	P	V	M	I	G	E	L	L	R	E	F	P	D	Y	T	W	Q	V	A	I	A	D	L	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.
Template Sequence		D	G	X	A	P	V	T	E	V	F	A	L	S	.	.	C	G	H	C	R	N	X	E	N	F	L	P	V	I	S	Q	E	A	G	T	D	I	G	K	X	H	I	T	F	N	Q	S	A	H	I	A	S	X	F	Y	Y	A	A	E	X	Q	V	D	G	A	P	D	H	A	F	X	E	D	L	F	A	A	T	Q	X
Template Known Secondary structure		S				S							T	T	.	.								G	G	G									T	S									S	S	S														T	T	S	S	S	S														T
Template Predicted Secondary structure															.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
																																												80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	A	I	G	D	R	F	G	V	F	R	F	P	A	T	L	V	F	T	G	G	N	Y	R	G	V	L	N	G	I	H	P	W	A	E	L	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																																																														.	.
Template Sequence		G	E	G	T	T	L	T	E	Q	Q	E	A	Y	S	K	A	F	T	S	R	G	L	V	S	P	Y	D	F	N	E	E	Q	R	D	T	L	I	K	K	V	D	N	A	K	X	L	S	E	K	S	G	I	S	S	V	P	T	F	V	V	.	.	N	G	K	Y	N	V	L	I	G	G	H	D	D	P	K	Q	I	A
Template Known Secondary structure			T	T	S															T	T	T				G	G	G																								T			S	S	S					.	.	T	T	T					G	G	G		S	S
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		118	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	M	R	G	L	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	T	I	R	Y	L	L	E
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions