Job Description P19931 Confidence 97.88% Date Thu Jan 5 11:37:40 GMT 2012 Rank 180 Aligned Residues 86 % Identity 26% Template c3dvwA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsba; PDBTitle: crystal structure of reduced dsba1 from neisseria2 meningitidis Resolution 1.50 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	P	D	G	V	V	L	L	S	S	D	P	K	R	T	P	E	V	S	D	N	P	V	M	I	G	E	L	L	R	E	F	P	D	Y	T	W	Q	V	A	I	A	D	L	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.																							.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.																							.
Template Sequence		Q	A	G	K	V	E	V	L	E	F	F	G	Y	F	.	C	P	H	C	A	H	L	E	P	V	L	S	K	H	A	K	S	F	K	D	D	M	.	Y	L	R	T	E	H	V	V	W	Q	K	E	M	L	T	L	A	R	L	A	A	A	V	D	M	A	A	A	D	S	K	D	V	A	N	S	H	I	F	D	A	M
Template Known Secondary structure		S	T	T	S									T	T	.																T	T			T	T		.										S	G	G	G															G	G	G
Template Predicted Secondary structure																.																							.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
																																													80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	A	I	G	D	R	F	G	V	F	R	F	P	A	T	L	V	F	T	G	G	N	Y	R	G	V	L	N	G	I	H	P	W	A	E	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.							.	.	.
Template Conservation																																																															.	.							.	.	.
Template Sequence		V	N	Q	K	I	K	L	Q	N	P	E	V	L	K	K	W	L	G	E	Q	T	A	F	D	G	K	K	V	L	A	A	Y	E	S	P	E	S	Q	A	R	A	D	K	M	Q	E	L	T	E	T	F	Q	I	D	G	T	P	T	V	I	V	.	.	G	G	K	Y	K	V	.	.	.	E	F	A	D	W	E	S	G
Template Known Secondary structure			T	S				T	T	S										T		T	T	T	T										S																	T	T			S	S	S					.	.	T	T	T				.	.	.			S	S
Template Predicted Secondary structure																																																															.	.							.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.				.	.	190	.	.	.	.	.
		117	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	L	M	R	G	L	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	N	T	I	D	L	L	A	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions