Return to main results Retrieve Phyre Job Id

Job DescriptionQ9JMS2
Confidence1.77%DateThu Jan 5 12:37:57 GMT 2012
Rank46Aligned Residues26
% Identity35%Templated1u58a2
SCOP infoMHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30..
Predicted Secondary structure 













Query SS confidence 





























Query Sequence  RIAYKSVIMLSLQPSCVKSNCQGDGDVPGQ
Query Conservation 





























Alig confidence 







....

















Template Conservation 

 

   ....
   

  
 







Template Sequence  RYAYTLVV. . . . DGTANTRRCFGTGHVDGE
Template Known Secondary structure  ....TTTTTT
Template Predicted Secondary structure  ....







Template SS confidence 





























   12....... 20.........30.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions