Return to main results Retrieve Phyre Job Id

Job DescriptionQ9JMS2
Confidence3.08%DateThu Jan 5 12:37:57 GMT 2012
Rank27Aligned Residues9
% Identity67%Templatec3trkA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:nonstructural polyprotein; PDBTitle: structure of the chikungunya virus nsp2 protease
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20..
Predicted Secondary structure 


Query SS confidence 








Query Sequence  LQPSCVKSN
Query Conservation 








Alig confidence 








Template Conservation   

 
 


Template Sequence  LKPPCVTSN
Template Known Secondary structure 

TT

BT
Template Predicted Secondary structure 








Template SS confidence 








   1286...1290....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions