 |
Job Description | P06960 | Confidence | 90.19% | Date | Thu Jan 5 10:59:30 GMT 2012 |
Rank | 169 | Aligned Residues | 75 |
% Identity | 15% | Template | d1t2da1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| LDH N-terminal domain-like
|
Resolution | 1.10 |
|
 |
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | |
. | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | M | T | L | V | Y | A | G | D | A | R | N | N | M | G | N | S | M | L | E | A | A | A | L | T | G | L | . |
D | L | R | L | L | A | P | K | A | C | W | P | E | E | S | L | V | A | E | C | S | A | L | A | E | K | H | G | G | K | I | T | L | T | E | D | V | A | A | G | V | K | G | A | D | F | I | Y | T | D |
Query Conservation |   |
|
|   |
|   |   |
|
|
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   | . |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|
|
| . |
| . |
|   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|
|   |
Template Sequence |   |
K | A | K | I | V | L | V | G | . |
S | . |
G | M | I | G | G | V | M | A | T | L | I | V | Q | K | N | L | G | D | V | V | L | F | D | I | V | K | N | M | P | H | G | K | A | L | D | T | S | H | T | N | V | M | A | Y | S | N | C | K | V | S | G | S | N | T | Y | D | D | L | A | G | A | D | V | V | I | V | T |
Template Known Secondary structure |   |
|
|  |  |  |  |  |
| . |
| . | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
| S | S | S | S |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  | T |
|
|
|
|  |  |  |  |
|
| G | G | G | G | T | T |
| S |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
| . |
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | |
. | |
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|