Job Description P06960 Confidence 100.00% Date Thu Jan 5 10:59:30 GMT 2012 Rank 2 Aligned Residues 331 % Identity 67% Template c3updA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: 2.9 angstrom crystal structure of ornithine carbamoyltransferase2 (argf) from vibrio vulnificus Resolution 2.91 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	L	Y	K	K	H	F	L	K	L	L	D	F	T	P	A	Q	F	T	S	L	L	T	L	A	A	Q	L	K	A	D	K	K	N	G	K	E	V	Q	K	L	T	G	K	N	I	A	L	I	F	E	K	D	S	T	R	T	R	C	S	F	E	V	A	A	F	D	Q	G	A	R	V	T	Y	L	G	P	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	N	L	R	N	R	N	F	L	K	L	L	D	F	S	T	K	E	I	Q	F	L	I	D	L	S	A	D	L	K	K	A	K	Y	A	G	T	E	Q	K	K	L	L	G	K	N	I	A	L	I	F	E	K	A	S	T	R	T	R	C	A	F	E	V	A	A	F	D	Q	G	A	Q	V	T	Y	I	G	P	S	G
Template Known Secondary structure					T	T			B			G	G	G	S																						T					S	S	T	T								S	S																T	T										S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	I	G	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	Y	D	G	I	Q	Y	R	G	H	G	Q	E	V	V	E	T	L	A	Q	Y	A	G	V	P	V	W	N	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	L	M	T	M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	I	G	D	K	E	S	M	K	D	T	A	R	V	L	G	R	M	Y	D	G	I	Q	Y	R	G	F	G	Q	A	I	V	E	E	L	G	A	F	A	G	V	P	V	W	N	G	L	T	D	E	F	H	P	T	Q	I	L	A	D	F	L	T	M	L	E	H	S	Q	G	K	A	L	A	D	I	Q	F	A	Y
Template Known Secondary structure		S		T	T	T	S	S														S						S	S												S	S	S								S	S																T	S	S	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	L	A	P	K	A	C	W	P	E	E	S	L	V	A	E	C	S	A	L	A	E	K	H	G	G	K	I	T	L	T	E	D	V	A	A	G	V	K	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	D	A	R	N	N	V	G	N	S	L	M	V	G	A	A	K	M	G	M	D	I	R	L	V	G	P	Q	A	Y	W	P	D	E	E	L	V	A	A	C	Q	A	I	A	K	Q	T	G	G	K	I	T	L	T	E	N	V	A	E	G	V	Q	G	C	D	F	L	Y	T	D	V	W	V	S	M	G	E	S	P
Template Known Secondary structure			S			S	S													T	T							S		G	G	G	S																	T							S							T	T		S								S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	W	A	E	R	I	A	L	L	R	G	Y	Q	V	N	A	Q	M	M	A	L	T	D	N	P	N	V	K	F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K	Q	M	A	K	E	F	D	L	H	G	G	M	E	V	T	D	E	V	F	E	S	A	A	S	I	V	F	D	Q	A	E	N	R	M
Query Conservation
Alig confidence																																																							.
Template Conservation																																																							.
Template Sequence		E	A	W	D	E	R	V	A	L	M	K	P	Y	Q	V	N	M	N	V	L	K	Q	T	G	N	P	N	V	K	F	M	H	C	L	P	A	F	H	N	D	E	T	T	I	G	K	Q	V	A	D	K	F	G	.	M	K	G	L	E	V	T	E	E	V	F	E	S	E	H	S	I	V	F	D	E	A	E	N	R	M
Template Known Secondary structure												G	G	G		B							T	T	T		T	T							S					S	S	S	S												.		S		S	S	B						T	S	T	T	B
Template Predicted Secondary structure																																																							.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		322	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	I	K	A	V	M	M	A	T	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	T	I	K	A	V	M	V	A	T	L	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions